RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 RANBP10Q6VN20 620 aa21.13■□□□□ 0.97
SND1-214ENST00000489417 SH2D3CQ8N5H7 860 aa21.13■□□□□ 0.97
SND1-214ENST00000489417 TTC8Q8TAM2 541 aa21.13■□□□□ 0.97
SND1-214ENST00000489417 UHMK1Q8TAS1 419 aaKnown RBP21.13■□□□□ 0.97
SND1-214ENST00000489417 PPM1EQ8WY54 764 aa21.13■□□□□ 0.97
SND1-214ENST00000489417 FEM1CQ96JP0 617 aa21.13■□□□□ 0.97
SND1-214ENST00000489417 RUFY1Q96T51 708 aa21.13■□□□□ 0.97
SND1-214ENST00000489417 EBNA1BP2Q99848 306 aaKnown RBP21.13■□□□□ 0.97
SND1-214ENST00000489417 VPS37BQ9H9H4 285 aa21.13■□□□□ 0.97
SND1-214ENST00000489417 LRRC4CQ9HCJ2 640 aa21.13■□□□□ 0.97
SND1-214ENST00000489417 SYBUQ9NX95 663 aa21.13■□□□□ 0.97
SND1-214ENST00000489417 GTSE1Q9NYZ3 720 aa21.13■□□□□ 0.97
SND1-214ENST00000489417 ERVW-1Q9UQF0 538 aa21.13■□□□□ 0.97
SND1-214ENST00000489417 MAD1L1Q9Y6D9 718 aa21.13■□□□□ 0.97
SND1-214ENST00000489417 ASLP04424 464 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 GJA4P35212 333 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 GPX6P59796 221 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 KDSRQ06136 332 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 ITPRIPL2Q3MIP1 535 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 ATXN7L2Q5T6C5 722 aaPredicted RBP21.12■□□□□ 0.97
SND1-214ENST00000489417 C22orf39Q6P5X5 142 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 NCEH1Q6PIU2 408 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 CAPN12Q6ZSI9 719 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 KDELC2Q7Z4H8 507 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 SRLQ86TD4 932 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 ISG20Q96AZ6 181 aaKnown RBP21.12■□□□□ 0.97
SND1-214ENST00000489417 STAMBPL1Q96FJ0 436 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 IFT43Q96FT9 208 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 CFAP36Q96G28 342 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 TM6SF2Q9BZW4 377 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 CEP44Q9C0F1 390 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 ZC3H7BQ9UGR2 993 aaKnown RBP21.12■□□□□ 0.97
SND1-214ENST00000489417 NFS1Q9Y697 457 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 LOC285095A0A1B0GVY8 99 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 C2CD4DB7Z1M9 353 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 ARNTLO00327 626 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 IGSF6O95976 241 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 PHBP35232 272 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 OPRD1P41143 372 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 CSNK1DP48730 415 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 AP1S1P61966 158 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 CRADDP78560 199 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 CDK18Q07002 472 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 CASC4Q6P4E1 433 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 OR2W6PQ8NHA6 318 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 NSMCE3Q96MG7 304 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 CIPCQ9C0C6 399 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 BRD9Q9H8M2 597 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 ARNT2Q9HBZ2 717 aa21.12■□□□□ 0.97
SND1-214ENST00000489417 A0A087WUV0 522 aaPredicted RBP21.11■□□□□ 0.97
SND1-214ENST00000489417 SPAG6O75602 509 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 EPOP01588 193 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 SHBGP04278 402 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 ATP5BP06576 529 aaKnown RBP21.11■□□□□ 0.97
SND1-214ENST00000489417 TPH1P17752 444 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 SSTR1P30872 391 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 EIF2DP41214 584 aaKnown RBP21.11■□□□□ 0.97
SND1-214ENST00000489417 CHRNA4P43681 627 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 EIF3BP55884 814 aaKnown RBP21.11■□□□□ 0.97
SND1-214ENST00000489417 IFFO1Q0D2I5 559 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 SLC1A5Q15758 541 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 DGKKQ5KSL6 1271 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 CERCAMQ5T4B2 595 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 CCNJLQ8IV13 435 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 SLC25A41Q8N5S1 370 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 DEFB123Q8N688 67 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 PCDH20Q8N6Y1 951 aaKnown RBP21.11■□□□□ 0.97
SND1-214ENST00000489417 CYB5D2Q8WUJ1 264 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 HLA-CQ95604 372 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 MRGPRX3Q96LB0 322 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 NAT9Q9BTE0 207 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 IL22Q9GZX6 179 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 TNKS2Q9H2K2 1166 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 SAMD15Q9P1V8 674 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 SLCO3A1Q9UIG8 710 aa21.11■□□□□ 0.97
SND1-214ENST00000489417 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.1■□□□□ 0.97
SND1-214ENST00000489417 AGPSO00116 658 aa21.1■□□□□ 0.97
SND1-214ENST00000489417 ATP9BO43861 1147 aa21.1■□□□□ 0.97
SND1-214ENST00000489417 ZNF821O75541 412 aaPredicted RBP21.1■□□□□ 0.97
SND1-214ENST00000489417 GSRP00390 522 aa21.1■□□□□ 0.97
SND1-214ENST00000489417 SRPRAP08240 638 aaKnown RBP21.1■□□□□ 0.97
SND1-214ENST00000489417 GSTA2P09210 222 aa21.1■□□□□ 0.97
SND1-214ENST00000489417 DLDP09622 509 aaKnown RBP21.1■□□□□ 0.97
SND1-214ENST00000489417 ATXN1LP0C7T5 689 aaKnown RBP21.1■□□□□ 0.97
SND1-214ENST00000489417 PGAM1P18669 254 aa21.1■□□□□ 0.97
SND1-214ENST00000489417 HLA-DPA1P20036 260 aa21.1■□□□□ 0.97
SND1-214ENST00000489417 MAPK8P45983 427 aa21.1■□□□□ 0.97
SND1-214ENST00000489417 VASPP50552 380 aaPredicted RBP21.1■□□□□ 0.97
SND1-214ENST00000489417 DLG2Q15700 870 aa21.1■□□□□ 0.97
SND1-214ENST00000489417 C3orf62Q6ZUJ4 267 aa21.1■□□□□ 0.97
SND1-214ENST00000489417 PHTF2Q8N3S3 785 aa21.1■□□□□ 0.97
SND1-214ENST00000489417 OR2AP1Q8NGE2 309 aa21.1■□□□□ 0.97
SND1-214ENST00000489417 SORCS1Q8WY21 1168 aa21.1■□□□□ 0.97
SND1-214ENST00000489417 ZBTB9Q96C00 473 aa21.1■□□□□ 0.97
SND1-214ENST00000489417 TRIB3Q96RU7 358 aa21.1■□□□□ 0.97
SND1-214ENST00000489417 PHF7Q9BWX1 381 aaPredicted RBP21.1■□□□□ 0.97
SND1-214ENST00000489417 TDRD1Q9BXT4 1180 aaKnown RBP21.1■□□□□ 0.97
SND1-214ENST00000489417 ELOVL2Q9NXB9 296 aa21.1■□□□□ 0.97
SND1-214ENST00000489417 ARIH1Q9Y4X5 557 aaPredicted RBP21.1■□□□□ 0.97
SND1-214ENST00000489417 RAI2Q9Y5P3 530 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms