RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 SYBUQ9NX95 663 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 COX16Q9P0S2 106 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 SEPT10Q9P0V9 454 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 DNAJB4Q9UDY4 337 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 STK39Q9UEW8 545 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 CHKBQ9Y259 395 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 ANKRD6Q9Y2G4 727 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 MFHAS1Q9Y4C4 1052 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 PCDHB12Q9Y5F1 795 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 MYO16Q9Y6X6 1858 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.58□□□□□ -1.04
VTI1A-207ENST00000489357 ZCWPW2A0A1B0GU75 182 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 GOLGA8RI6L899 631 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 MAFKO60675 156 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 CCDC22O60826 627 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 SIN3BO75182 1162 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 TADA2AO75478 443 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 FGF18O76093 207 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 IL2RAP01589 272 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 ALDOAP04075 364 aaKnown RBP8.58□□□□□ -1.04
VTI1A-207ENST00000489357 ALDH2P05091 517 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 NFKB1P19838 968 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 FGFR3P22607 806 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 IGFBP6P24592 240 aaPredicted RBP8.58□□□□□ -1.04
VTI1A-207ENST00000489357 CD68P34810 354 aaPredicted RBP8.58□□□□□ -1.04
VTI1A-207ENST00000489357 CTNNB1P35222 781 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 PPM1AP35813 382 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 GRIA1P42261 906 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 CTSOP43234 321 aaPredicted RBP8.58□□□□□ -1.04
VTI1A-207ENST00000489357 RENBPP51606 427 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 ARFIP2P53365 341 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 SESN2P58004 480 aaPredicted RBP8.58□□□□□ -1.04
VTI1A-207ENST00000489357 YBEYP58557 167 aaPredicted RBP8.58□□□□□ -1.04
VTI1A-207ENST00000489357 RPL10AP62906 217 aaKnown RBP8.58□□□□□ -1.04
VTI1A-207ENST00000489357 PDE1BQ01064 536 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 OCRLQ01968 901 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 GPR17Q13304 367 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 TRIP4Q15650 581 aaPredicted RBP8.58□□□□□ -1.04
VTI1A-207ENST00000489357 CCDC85BQ15834 202 aaPredicted RBP8.58□□□□□ -1.04
VTI1A-207ENST00000489357 SLC14A2Q15849 920 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 SPRED3Q2MJR0 410 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 ANKRD20A4Q4UJ75 823 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 SLC39A12Q504Y0 691 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 PCID2Q5JVF3 399 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 TMCO4Q5TGY1 634 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 KIAA0408Q6ZU52 694 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 ANKS3Q6ZW76 656 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 CLNKQ7Z7G1 428 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 SCD5Q86SK9 330 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 DDX53Q86TM3 631 aaKnown RBP8.58□□□□□ -1.04
VTI1A-207ENST00000489357 RASSF3Q86WH2 238 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 CRLF3Q8IUI8 442 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 NUDCD3Q8IVD9 361 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 WDR75Q8IWA0 830 aaKnown RBP8.58□□□□□ -1.04
VTI1A-207ENST00000489357 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.58□□□□□ -1.04
VTI1A-207ENST00000489357 ARHGAP12Q8IWW6 846 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 GPR65Q8IYL9 337 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 KIRREL3Q8IZU9 778 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 SIX5Q8N196 739 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.58□□□□□ -1.04
VTI1A-207ENST00000489357 ERP27Q96DN0 273 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 ZNF558Q96NG5 402 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 RANBP9Q96S59 729 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 GORASP1Q9BQQ3 440 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 MCMBPQ9BTE3 642 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 MMADHCQ9H3L0 296 aaPredicted RBP8.58□□□□□ -1.04
VTI1A-207ENST00000489357 TLE6Q9H808 572 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 ALG13Q9NP73 1137 aaKnown RBP8.58□□□□□ -1.04
VTI1A-207ENST00000489357 NPHS2Q9NP85 383 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 TLR8Q9NR97 1041 aaKnown RBP8.58□□□□□ -1.04
VTI1A-207ENST00000489357 TMEM248Q9NWD8 314 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 OSER1Q9NX31 292 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 MARCH5Q9NX47 278 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 SPG21Q9NZD8 308 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.58□□□□□ -1.04
VTI1A-207ENST00000489357 GMPR2Q9P2T1 348 aaKnown RBP8.58□□□□□ -1.04
VTI1A-207ENST00000489357 CACNG4Q9UBN1 327 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 ZFP69BQ9UJL9 534 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 IRAK3Q9Y616 596 aa8.58□□□□□ -1.04
VTI1A-207ENST00000489357 TTC28Q96AY4 2481 aa8.57□□□□□ -1.04
VTI1A-207ENST00000489357 PRUNE2Q8WUY3 3088 aa8.57□□□□□ -1.04
VTI1A-207ENST00000489357 TMEM229AB2RXF0 380 aa8.57□□□□□ -1.04
VTI1A-207ENST00000489357 E9PAM4 449 aa8.57□□□□□ -1.04
VTI1A-207ENST00000489357 PLIN3O60664 434 aa8.57□□□□□ -1.04
VTI1A-207ENST00000489357 HAUS5O94927 633 aa8.57□□□□□ -1.04
VTI1A-207ENST00000489357 PAPSS2O95340 614 aaPredicted RBP8.57□□□□□ -1.04
VTI1A-207ENST00000489357 JCHAINP01591 159 aa8.57□□□□□ -1.04
VTI1A-207ENST00000489357 IGLV3-27P01718 113 aa8.57□□□□□ -1.04
VTI1A-207ENST00000489357 SERPINE1P05121 402 aa8.57□□□□□ -1.04
VTI1A-207ENST00000489357 HOXB8P17481 243 aaPredicted RBP8.57□□□□□ -1.04
VTI1A-207ENST00000489357 IBSPP21815 317 aaPredicted RBP8.57□□□□□ -1.04
VTI1A-207ENST00000489357 CALB2P22676 271 aa8.57□□□□□ -1.04
VTI1A-207ENST00000489357 YWHAQP27348 245 aa8.57□□□□□ -1.04
VTI1A-207ENST00000489357 TYK2P29597 1187 aa8.57□□□□□ -1.04
VTI1A-207ENST00000489357 PBX3P40426 434 aa8.57□□□□□ -1.04
VTI1A-207ENST00000489357 OR1G1P47890 313 aa8.57□□□□□ -1.04
VTI1A-207ENST00000489357 MAPKAPK2P49137 400 aa8.57□□□□□ -1.04
VTI1A-207ENST00000489357 ALDH7A1P49419 539 aaKnown RBP8.57□□□□□ -1.04
VTI1A-207ENST00000489357 KPNA2P52292 529 aaKnown RBP8.57□□□□□ -1.04
VTI1A-207ENST00000489357 TBX4P57082 545 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms