RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 NFKBIBQ15653 356 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 INAVAQ3KP66 663 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 PARP15Q460N3 678 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 ZNF805Q5CZA5 627 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 NEK5Q6P3R8 708 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 ARHGAP36Q6ZRI8 547 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 RFX8Q6ZV50 586 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 PTAR1Q7Z6K3 402 aaPredicted RBP14.22□□□□□ -0.13
VTI1A-206ENST00000489142 TP53INP2Q8IXH6 220 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 NPWQ8N729 165 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 XPO4Q9C0E2 1151 aaKnown RBP14.22□□□□□ -0.13
VTI1A-206ENST00000489142 THAP2Q9H0W7 228 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 ISCUQ9H1K1 167 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 LRRC19Q9H756 370 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 ZWILCHQ9H900 591 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 LHX3Q9UBR4 397 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 UBA2Q9UBT2 640 aaPredicted RBP14.22□□□□□ -0.13
VTI1A-206ENST00000489142 CAPN11Q9UMQ6 739 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 SCINQ9Y6U3 715 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 A0A087X0T9 212 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 FAM149AA5PLN7 773 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 POM121BA6NF01 834 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 ZSCAN5CA6NGD5 496 aaPredicted RBP14.21□□□□□ -0.13
VTI1A-206ENST00000489142 DFFAO00273 331 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 IGSF6O95976 241 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 SERPING1P05155 500 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 FAM228BP0C875 321 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 MYBL1P10243 752 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 ERCC2P18074 760 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 IL1R2P27930 398 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 CASP14P31944 242 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 PAPOLAP51003 745 aaKnown RBP14.21□□□□□ -0.13
VTI1A-206ENST00000489142 RPS21P63220 83 aaKnown RBP14.21□□□□□ -0.13
VTI1A-206ENST00000489142 ZBED6P86452 979 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 ZNF542PQ5EBM4 170 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 TXNRD3NBQ6F5E7 133 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 KIAA1161Q6NSJ0 714 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 GDPD4Q6W3E5 623 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 KANSL1Q7Z3B3 1105 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 IQCHQ86VS3 1027 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 PLPP6Q8IY26 295 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 SLC22A18ASQ8N1D0 253 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 FNIP1Q8TF40 1166 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 HSPH1Q92598 858 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 ARHGEF26Q96DR7 871 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 TRIM11Q96F44 468 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 FEM1CQ96JP0 617 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 CNDP2Q96KP4 475 aaKnown RBP14.21□□□□□ -0.13
VTI1A-206ENST00000489142 SLC17A9Q9BYT1 436 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 ERVMER34-1Q9H9K5 563 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 PDFQ9HBH1 243 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 ZMIZ1Q9ULJ6 1067 aa14.21□□□□□ -0.13
VTI1A-206ENST00000489142 ARID1BQ8NFD5 2236 aaPredicted RBP14.21□□□□□ -0.14
VTI1A-206ENST00000489142 CXorf51AA0A1B0GTR3 108 aa14.2□□□□□ -0.14
VTI1A-206ENST00000489142 AP1G1O43747 822 aa14.2□□□□□ -0.14
VTI1A-206ENST00000489142 MAGEC1O60732 1142 aa14.2□□□□□ -0.14
VTI1A-206ENST00000489142 PRAMEF11O60813 436 aa14.2□□□□□ -0.14
VTI1A-206ENST00000489142 LDOC1O95751 146 aaPredicted RBP14.2□□□□□ -0.14
VTI1A-206ENST00000489142 RGRP47804 291 aa14.2□□□□□ -0.14
VTI1A-206ENST00000489142 SEMG2Q02383 582 aa14.2□□□□□ -0.14
VTI1A-206ENST00000489142 OVGP1Q12889 678 aa14.2□□□□□ -0.14
VTI1A-206ENST00000489142 INO80DQ53TQ3 878 aaPredicted RBP14.2□□□□□ -0.14
VTI1A-206ENST00000489142 DHRS13Q6UX07 377 aa14.2□□□□□ -0.14
VTI1A-206ENST00000489142 Q6ZSR6 202 aa14.2□□□□□ -0.14
VTI1A-206ENST00000489142 TTC7BQ86TV6 843 aa14.2□□□□□ -0.14
VTI1A-206ENST00000489142 CPNE8Q86YQ8 564 aa14.2□□□□□ -0.14
VTI1A-206ENST00000489142 ARHGAP12Q8IWW6 846 aa14.2□□□□□ -0.14
VTI1A-206ENST00000489142 ZCCHC14Q8WYQ9 949 aaKnown RBP14.2□□□□□ -0.14
VTI1A-206ENST00000489142 SYN2Q92777 582 aaPredicted RBP14.2□□□□□ -0.14
VTI1A-206ENST00000489142 BMFQ96LC9 184 aa14.2□□□□□ -0.14
VTI1A-206ENST00000489142 NCAPGQ9BPX3 1015 aa14.2□□□□□ -0.14
VTI1A-206ENST00000489142 WRAP53Q9BUR4 548 aaKnown RBP14.2□□□□□ -0.14
VTI1A-206ENST00000489142 NUP85Q9BW27 656 aa14.2□□□□□ -0.14
VTI1A-206ENST00000489142 OSBPL1AQ9BXW6 950 aa14.2□□□□□ -0.14
VTI1A-206ENST00000489142 MRPL47Q9HD33 250 aaKnown RBP14.2□□□□□ -0.14
VTI1A-206ENST00000489142 UCKL1Q9NWZ5 548 aa14.2□□□□□ -0.14
VTI1A-206ENST00000489142 CWC15Q9P013 229 aaKnown RBP14.2□□□□□ -0.14
VTI1A-206ENST00000489142 LUC7L2Q9Y383 392 aaKnown RBP14.2□□□□□ -0.14
VTI1A-206ENST00000489142 ARHGAP42A6NI28 874 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 A6NNZ2 444 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 ENC1O14682 589 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 YKT6O15498 198 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 FFAR2O15552 330 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 DKK1O94907 266 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 PRKCGP05129 697 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 PTMSP20962 102 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 HTR7P34969 479 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 RXRGP48443 463 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 NDST2P52849 883 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 RAD51Q06609 339 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 SGCGQ13326 291 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 DPYSQ14117 519 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 TPRG1LQ5T0D9 272 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 ABI3BPQ7Z7G0 1075 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 VPS36Q86VN1 386 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 OXR1Q8N573 874 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 CASKIN2Q8WXE0 1202 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 LRIG1Q96JA1 1093 aa14.19□□□□□ -0.14
VTI1A-206ENST00000489142 KLF6Q99612 283 aaPredicted RBP14.19□□□□□ -0.14
VTI1A-206ENST00000489142 SP110Q9HB58 689 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms