RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 THAP12O43422 761 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 HSF2BPO75031 334 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 ZMPSTE24O75844 475 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 ZNF202O95125 648 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 GKP32189 559 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 EIF4A3P38919 411 aaKnown RBP16.44■□□□□ 0.22
USP48-210ENST00000489108 YPEL5P62699 121 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 CETN1Q12798 172 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 MORC3Q14149 939 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 MEA1Q16626 185 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 DTX1Q86Y01 620 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 WDTC1Q8N5D0 677 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 PCDH20Q8N6Y1 951 aaKnown RBP16.44■□□□□ 0.22
USP48-210ENST00000489108 PCDH19Q8TAB3 1148 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 SCG3Q8WXD2 468 aaKnown RBP16.44■□□□□ 0.22
USP48-210ENST00000489108 USP7Q93009 1102 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 RAB7BQ96AH8 199 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 CPXM1Q96SM3 734 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 GTPBP4Q9BZE4 634 aaKnown RBP16.44■□□□□ 0.22
USP48-210ENST00000489108 CEP44Q9C0F1 390 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 TKTL2Q9H0I9 626 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 EPN3Q9H201 632 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 GOLPH3LQ9H4A5 285 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 ASNSD1Q9NWL6 643 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 FOXJ2Q9P0K8 574 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 HECAQ9UBI9 543 aaPredicted RBP16.44■□□□□ 0.22
USP48-210ENST00000489108 FCF1Q9Y324 198 aaKnown RBP16.44■□□□□ 0.22
USP48-210ENST00000489108 PCDHB11Q9Y5F2 797 aa16.44■□□□□ 0.22
USP48-210ENST00000489108 LRRK2Q5S007 2527 aa16.43■□□□□ 0.22
USP48-210ENST00000489108 OR1E1P30953 314 aa16.43■□□□□ 0.22
USP48-210ENST00000489108 SERPINH1P50454 418 aaKnown RBP16.43■□□□□ 0.22
USP48-210ENST00000489108 MAPK10P53779 464 aa16.43■□□□□ 0.22
USP48-210ENST00000489108 SLC20A2Q08357 652 aa16.43■□□□□ 0.22
USP48-210ENST00000489108 PNOCQ13519 176 aa16.43■□□□□ 0.22
USP48-210ENST00000489108 ELOCQ15369 112 aa16.43■□□□□ 0.22
USP48-210ENST00000489108 ZNF658Q5TYW1 1059 aaPredicted RBP16.43■□□□□ 0.22
USP48-210ENST00000489108 RETSATQ6NUM9 610 aa16.43■□□□□ 0.22
USP48-210ENST00000489108 LVRNQ6Q4G3 990 aa16.43■□□□□ 0.22
USP48-210ENST00000489108 MACC1Q6ZN28 852 aa16.43■□□□□ 0.22
USP48-210ENST00000489108 HID1Q8IV36 788 aa16.43■□□□□ 0.22
USP48-210ENST00000489108 Q8N9G6 341 aaPredicted RBP16.43■□□□□ 0.22
USP48-210ENST00000489108 ZNF564Q8TBZ8 553 aaPredicted RBP16.43■□□□□ 0.22
USP48-210ENST00000489108 TSACCQ96A04 125 aaPredicted RBP16.43■□□□□ 0.22
USP48-210ENST00000489108 WDCPQ9H6R7 721 aa16.43■□□□□ 0.22
USP48-210ENST00000489108 MBNL1Q9NR56 388 aaKnown RBP16.43■□□□□ 0.22
USP48-210ENST00000489108 PIGVQ9NUD9 493 aa16.43■□□□□ 0.22
USP48-210ENST00000489108 ARHGEF38Q9NXL2 777 aa16.43■□□□□ 0.22
USP48-210ENST00000489108 GPR34Q9UPC5 381 aa16.43■□□□□ 0.22
USP48-210ENST00000489108 NBASA2RRP1 2371 aa16.43■□□□□ 0.22
USP48-210ENST00000489108 DOCK4Q8N1I0 1966 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 CLEC18AA5D8T8 446 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 C9orf172C9J069 976 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 P4HA2O15460 535 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 CTSEP14091 401 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 TFE3P19532 575 aaPredicted RBP16.42■□□□□ 0.22
USP48-210ENST00000489108 GNA15P30679 374 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 ARF5P84085 180 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 FOXK1P85037 733 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 LRRC63Q05C16 580 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 ZFP36L1Q07352 338 aaKnown RBP16.42■□□□□ 0.22
USP48-210ENST00000489108 CCDC40Q4G0X9 1142 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 COBLL1Q53SF7 1204 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 OTUD1Q5VV17 481 aaPredicted RBP16.42■□□□□ 0.22
USP48-210ENST00000489108 CLEC18BQ6UXF7 455 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 LRRC31Q6UY01 552 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 FAM183BPQ6ZVS7 135 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 FSTL5Q8N475 847 aaPredicted RBP16.42■□□□□ 0.22
USP48-210ENST00000489108 RYBPQ8N488 228 aaPredicted RBP16.42■□□□□ 0.22
USP48-210ENST00000489108 CLEC18CQ8NCF0 446 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 OR6K2Q8NGY2 324 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 JPH3Q8WXH2 748 aaPredicted RBP16.42■□□□□ 0.22
USP48-210ENST00000489108 EDEM3Q9BZQ6 932 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 TM6SF2Q9BZW4 377 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 ADNPQ9H2P0 1102 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 UBE2TQ9NPD8 197 aaPredicted RBP16.42■□□□□ 0.22
USP48-210ENST00000489108 TMPRSS4Q9NRS4 437 aa16.42■□□□□ 0.22
USP48-210ENST00000489108 A0A1W2PQ27 194 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 A0A1W2PQ64 194 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 A0A1W2PQC6 194 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 ILVBLA1L0T0 632 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 MMP20O60882 483 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 CD160O95971 181 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 ALPIP09923 528 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 CXCR3P49682 368 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 BLKP51451 505 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 HK3P52790 923 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 C4orf17Q53FE4 359 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 ZNF805Q5CZA5 627 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 ARTNQ5T4W7 220 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 C11orf57Q6ZUT1 292 aaPredicted RBP16.41■□□□□ 0.22
USP48-210ENST00000489108 NYAP1Q6ZVC0 841 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 RD3Q7Z3Z2 195 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 CCNJLQ8IV13 435 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 SLC12A9Q9BXP2 914 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 ATP13A1Q9HD20 1204 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 RMND1Q9NWS8 449 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 MAN2B2Q9Y2E5 1009 aa16.41■□□□□ 0.22
USP48-210ENST00000489108 AREL1O15033 823 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 SRGAP2O75044 1071 aa16.4■□□□□ 0.22
USP48-210ENST00000489108 DAB1O75553 588 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms