RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 LRIT1Q9P2V4 623 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 HOOK1Q9UJC3 728 aaKnown RBP3.53□□□□□ -1.84
PRPF4-203ENST00000488937 FBXL5Q9UKA1 691 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 RIMKLBQ9ULI2 386 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 UBE2J1Q9Y385 318 aaPredicted RBP3.53□□□□□ -1.84
PRPF4-203ENST00000488937 PCDHB7Q9Y5E2 793 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 LIPGQ9Y5X9 500 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 AP1M2Q9Y6Q5 423 aa3.53□□□□□ -1.84
PRPF4-203ENST00000488937 ZNF644Q9H582 1327 aaPredicted RBP3.52□□□□□ -1.85
PRPF4-203ENST00000488937 CLSPNQ9HAW4 1339 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 TEX13CA0A0J9YWL9 993 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 A0A1W2PRG0 241 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 A0A1W2PRV1 198 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 PER2O15055 1255 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 RGS10O43665 173 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 LIASO43766 372 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 NOL3O60936 208 aaKnown RBP3.52□□□□□ -1.85
PRPF4-203ENST00000488937 DDHD2O94830 711 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 CSF1RP07333 972 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 ZFYP08048 801 aaPredicted RBP3.52□□□□□ -1.85
PRPF4-203ENST00000488937 VSIG10L2P0DP72 767 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 ARSAP15289 507 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 ZNF37AP17032 561 aaPredicted RBP3.52□□□□□ -1.85
PRPF4-203ENST00000488937 PBLDP30039 288 aaPredicted RBP3.52□□□□□ -1.85
PRPF4-203ENST00000488937 UQCRC1P31930 480 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 THBS4P35443 961 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 IL15P40933 162 aaPredicted RBP3.52□□□□□ -1.85
PRPF4-203ENST00000488937 MTNR1AP48039 350 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 KHKP50053 298 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 ZNF81P51508 661 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 CCR3P51677 355 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 LUMP51884 338 aaPredicted RBP3.52□□□□□ -1.85
PRPF4-203ENST00000488937 MFAP4P55083 255 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 ADARP55265 1226 aaKnown RBP3.52□□□□□ -1.85
PRPF4-203ENST00000488937 ATP2C1P98194 919 aaPredicted RBP3.52□□□□□ -1.85
PRPF4-203ENST00000488937 GOLGA8DPQ0D2H9 430 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 LMAN2Q12907 356 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 SGCGQ13326 291 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 ZNF273Q14593 569 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 DPCR1Q3MIW9 517 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 LEXMQ3ZCV2 418 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 ANKRD20A4Q4UJ75 823 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 CEP55Q53EZ4 464 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 ANKRD20A8PQ5CZ79 823 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 ZNF667Q5HYK9 610 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 ANKRD20A2Q5SQ80 823 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 ANKRD20A1Q5TYW2 823 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 C12orf60Q5U649 245 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 ANKRD20A3Q5VUR7 823 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 CCDC144NLQ6NUI1 221 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 TMEM81Q6P7N7 255 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 C17orf99Q6UX52 265 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 KIAA1324Q6UXG2 1013 aaKnown RBP3.52□□□□□ -1.85
PRPF4-203ENST00000488937 RHPN2Q8IUC4 686 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 SYCP3Q8IZU3 236 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 FAM185AQ8N0U4 392 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 MMP21Q8N119 569 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 SIX6OS1Q8N1H7 587 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 AFAP1Q8N556 730 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 RNF169Q8NCN4 708 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 SLC17A8Q8NDX2 589 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 GMCL1P1Q8NEA9 526 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 SHCBP1Q8NEM2 672 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 CTCFLQ8NI51 663 aaPredicted RBP3.52□□□□□ -1.85
PRPF4-203ENST00000488937 PPP2R3CQ969Q6 453 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 SAT2Q96F10 170 aaPredicted RBP3.52□□□□□ -1.85
PRPF4-203ENST00000488937 CNDP1Q96KN2 507 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 CFAP53Q96M91 514 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 SRSF8Q9BRL6 282 aaKnown RBP3.52□□□□□ -1.85
PRPF4-203ENST00000488937 ANP32EQ9BTT0 268 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 CCDC106Q9BWC9 280 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 GLIS2Q9BZE0 524 aaPredicted RBP3.52□□□□□ -1.85
PRPF4-203ENST00000488937 WDR11Q9BZH6 1224 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 TRIM7Q9C029 511 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 TRIM6Q9C030 488 aaPredicted RBP3.52□□□□□ -1.85
PRPF4-203ENST00000488937 TTYH3Q9C0H2 523 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 CTDSP1Q9GZU7 261 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 GSTO2Q9H4Y5 243 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 EPHX3Q9H6B9 360 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 ABCB8Q9NUT2 735 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 THAP1Q9NVV9 213 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 ABI3Q9P2A4 366 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 ZNF624Q9P2J8 865 aaPredicted RBP3.52□□□□□ -1.85
PRPF4-203ENST00000488937 AMACRQ9UHK6 382 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 MKLN1Q9UL63 735 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 CDH7Q9ULB5 785 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 NENFQ9UMX5 172 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 PPIEQ9UNP9 301 aaKnown RBP3.52□□□□□ -1.85
PRPF4-203ENST00000488937 MTMR6Q9Y217 621 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 SLC27A6Q9Y2P4 619 aa3.52□□□□□ -1.85
PRPF4-203ENST00000488937 RBM8AQ9Y5S9 174 aaKnown RBP3.52□□□□□ -1.85
PRPF4-203ENST00000488937 LOC100509620A0A075B734 347 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 A0A087WV48 116 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 GPR75-ASB3A0A0A6YYF3 556 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 CDHR4A6H8M9 788 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 GRM8O00222 908 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 PRPF4O43172 522 aaKnown RBP eCLIP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 ZBTB43O43298 467 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 CA12O43570 354 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms