RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 AASSQ9UDR5 926 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 ATP5BP06576 529 aaKnown RBP16.35■□□□□ 0.21
MCF2L-229ENST00000488765 NAT2P11245 290 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 VBP1P61758 197 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 ZNF846Q147U1 533 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 CATSPEREQ5SY80 951 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 AGAP7PQ5VUJ5 663 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 PPP4R4Q6NUP7 873 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 DHRSXQ8N5I4 330 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 GOLM1Q8NBJ4 401 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 ZNF420Q8TAQ5 688 aaPredicted RBP16.35■□□□□ 0.21
MCF2L-229ENST00000488765 EFHD1Q9BUP0 239 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 DHX33Q9H6R0 707 aaKnown RBP16.35■□□□□ 0.21
MCF2L-229ENST00000488765 MAGEE1Q9HCI5 957 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 PTPRHQ9HD43 1115 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 DCDC2Q9UHG0 476 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 SLX4Q8IY92 1834 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 LINC00854A0A1B0GVQ3 168 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 FAM159BA6NKW6 160 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 HOXC11O43248 304 aaPredicted RBP16.35■□□□□ 0.21
MCF2L-229ENST00000488765 CRYZL1O95825 349 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 BMP4P12644 408 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 PRKCAP17252 672 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 YWHABP31946 246 aaKnown RBP16.35■□□□□ 0.21
MCF2L-229ENST00000488765 NDUFA5Q16718 116 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 TJAP1Q5JTD0 557 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 PLEKHG7Q6ZR37 379 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 FRA10AC1Q70Z53 315 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 NDNFQ8TB73 568 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 GTSE1Q9NYZ3 720 aa16.35■□□□□ 0.21
MCF2L-229ENST00000488765 CAB39Q9Y376 341 aaPredicted RBP16.35■□□□□ 0.21
MCF2L-229ENST00000488765 HDAC3O15379 428 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 PCNAP12004 261 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 KCNA2P16389 499 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 CHRM3P20309 590 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 NT5C2P49902 561 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 ECT2LQ008S8 904 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 SPP2Q13103 211 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 CAMK1DQ8IU85 385 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.34■□□□□ 0.21
MCF2L-229ENST00000488765 DDIASQ8IXT1 998 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 CMTR2Q8IYT2 770 aaKnown RBP16.34■□□□□ 0.21
MCF2L-229ENST00000488765 TP53I13Q8NBR0 393 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-229ENST00000488765 TNIP2Q8NFZ5 429 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 IL31RAQ8NI17 732 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 PBXIP1Q96AQ6 731 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 PEBP4Q96S96 227 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 TEKT3Q9BXF9 490 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 ZBTB26Q9HCK0 441 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 PKD2L2Q9NZM6 624 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 SEPT10Q9P0V9 454 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 USP18Q9UMW8 372 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 CDYLQ9Y232 598 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 SBF2Q86WG5 1849 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 UBR3Q6ZT12 1888 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 INMTO95050 263 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 GTF2E2P29084 291 aaKnown RBP16.34■□□□□ 0.21
MCF2L-229ENST00000488765 GTF2BQ00403 316 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 CDK18Q07002 472 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 ZNF460Q14592 562 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 SIGIRRQ6IA17 410 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 DENND1BQ6P3S1 775 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 TRAF7Q6Q0C0 670 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 TMEM126BQ8IUX1 230 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 SLC22A15Q8IZD6 547 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 CADM2Q8N3J6 435 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 SDR16C5Q8N3Y7 309 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 SHCBP1Q8NEM2 672 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 TMC2Q8TDI7 906 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 DOK1Q99704 481 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 TASP1Q9H6P5 420 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 RSAD1Q9HA92 442 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 SCN9AQ15858 1988 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 ZNF541Q9H0D2 1346 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 TRDMT1O14717 391 aaKnown RBP16.34■□□□□ 0.21
MCF2L-229ENST00000488765 GRID2O43424 1007 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 CCNKO75909 580 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 MYF6P23409 242 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 ARNTP27540 789 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 SLC7A1P30825 629 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 RPL14P50914 215 aaKnown RBP16.34■□□□□ 0.21
MCF2L-229ENST00000488765 CCSAPQ6IQ19 270 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-229ENST00000488765 NEK5Q6P3R8 708 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 TBPL2Q6SJ96 375 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 PAGE2Q7Z2X7 111 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 GALNT13Q8IUC8 556 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 CPSF7Q8N684 471 aaKnown RBP16.34■□□□□ 0.21
MCF2L-229ENST00000488765 TMEM161BQ8NDZ6 487 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 OR13F1Q8NGS4 319 aa16.34■□□□□ 0.21
MCF2L-229ENST00000488765 A0A096LPK6 155 aa16.33■□□□□ 0.21
MCF2L-229ENST00000488765 LOC105371267A0A1B0GV96 52 aa16.33■□□□□ 0.21
MCF2L-229ENST00000488765 CCDC162PA2VCL2 907 aa16.33■□□□□ 0.21
MCF2L-229ENST00000488765 INPP4BO15327 924 aa16.33■□□□□ 0.21
MCF2L-229ENST00000488765 TRIM13O60858 407 aa16.33■□□□□ 0.21
MCF2L-229ENST00000488765 IFI30P13284 250 aa16.33■□□□□ 0.21
MCF2L-229ENST00000488765 RAP1GAPP47736 663 aa16.33■□□□□ 0.21
MCF2L-229ENST00000488765 CCT8P50990 548 aa16.33■□□□□ 0.21
MCF2L-229ENST00000488765 BCAR1P56945 870 aa16.33■□□□□ 0.21
MCF2L-229ENST00000488765 ELMOD2Q8IZ81 293 aa16.33■□□□□ 0.21
MCF2L-229ENST00000488765 BEND7Q8N7W2 519 aaPredicted RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms