RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 MYO6Q9UM54 1294 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 FREM2Q5SZK8 3169 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 SPEGQ15772 3267 aa12.63□□□□□ -0.39
SREBF1-215ENST00000487401 TCRBV5S1A1TA0A578 114 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 WASH4PA8MWX3 477 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 H3BM21 787 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 SCAMP1O15126 338 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 TEX33O43247 280 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 DAPK3O43293 454 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 PSMA2P25787 234 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 HTR7P34969 479 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 DUSP3P51452 185 aaPredicted RBP12.62□□□□□ -0.39
SREBF1-215ENST00000487401 TPI1P60174 286 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 MAMLD1Q13495 774 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 SERINC3Q13530 473 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 FZD2Q14332 565 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 ASIC2Q16515 512 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 COL28A1Q2UY09 1125 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 PPP1R15BQ5SWA1 713 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 CXorf40AQ8TE69 158 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 NCAPGQ9BPX3 1015 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 DUSP23Q9BVJ7 150 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 C1QTNF7Q9BXJ2 289 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 KLC2Q9H0B6 622 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 NOL6Q9H6R4 1146 aaKnown RBP12.62□□□□□ -0.39
SREBF1-215ENST00000487401 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
SREBF1-215ENST00000487401 TAS2R14Q9NYV8 317 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 NLGN3Q9NZ94 848 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 CLCA2Q9UQC9 943 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 ITM2BQ9Y287 266 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 DMXL2Q8TDJ6 3036 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 CEP192Q8TEP8 1941 aa12.62□□□□□ -0.39
SREBF1-215ENST00000487401 WDFY3Q8IZQ1 3526 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 SPTY2D1-AS1A0A0U1RR47 76 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 MMP20O60882 483 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 MT-CO3P00414 261 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 CSF2P04141 144 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 CKMT1AP12532 417 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 TIMP2P16035 220 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 INSM1Q01101 510 aaPredicted RBP12.61□□□□□ -0.39
SREBF1-215ENST00000487401 SEMG2Q02383 582 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 PDE1CQ14123 709 aaPredicted RBP12.61□□□□□ -0.39
SREBF1-215ENST00000487401 PTK2BQ14289 1009 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 CYTH1Q15438 398 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 PARGQ86W56 976 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 CACTIN-AS1Q8N1I8 211 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 UMODL1-AS1Q8N2C9 162 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 NETO2Q8NC67 525 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 DENND6BQ8NEG7 585 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 RFFLQ8WZ73 363 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 BAP1Q92560 729 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 KLF6Q99612 283 aaPredicted RBP12.61□□□□□ -0.39
SREBF1-215ENST00000487401 BPIFA3Q9BQP9 254 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 NRSN2Q9GZP1 204 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 DHX35Q9H5Z1 703 aaKnown RBP12.61□□□□□ -0.39
SREBF1-215ENST00000487401 USP29Q9HBJ7 922 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 SCUBE2Q9NQ36 999 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 DKK3Q9UBP4 350 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 UBA2Q9UBT2 640 aaPredicted RBP12.61□□□□□ -0.39
SREBF1-215ENST00000487401 GGT7Q9UJ14 662 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 AP4E1Q9UPM8 1137 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 MFHAS1Q9Y4C4 1052 aa12.61□□□□□ -0.39
SREBF1-215ENST00000487401 ARHGAP42A6NI28 874 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 LRRC53A6NM62 1247 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 EIF3CLB5ME19 914 aaKnown RBP12.6□□□□□ -0.39
SREBF1-215ENST00000487401 K7ESM1 405 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 EEF2KO00418 725 aaKnown RBP12.6□□□□□ -0.39
SREBF1-215ENST00000487401 AREL1O15033 823 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 TM7SF2O76062 418 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 RNF8O76064 485 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 FTLP02792 175 aaPredicted RBP12.6□□□□□ -0.39
SREBF1-215ENST00000487401 NME1P15531 152 aaKnown RBP12.6□□□□□ -0.39
SREBF1-215ENST00000487401 JUNDP17535 347 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 SUOXP51687 545 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 NDST2P52849 883 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 THOP1P52888 689 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 OGDHQ02218 1023 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 LRRC73Q5JTD7 316 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 CFAP58Q5T655 872 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 ERMARDQ5T6L9 678 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 PDZD3Q86UT5 571 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 VPS36Q86VN1 386 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 HCAR2Q8TDS4 363 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 LMX1AQ8TE12 382 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 BTN2A2Q8WVV5 523 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 APOLD1Q96LR9 279 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 DCBLD2Q96PD2 775 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 EIF3CQ99613 913 aaKnown RBP12.6□□□□□ -0.39
SREBF1-215ENST00000487401 CPEB1Q9BZB8 566 aaKnown RBP12.6□□□□□ -0.39
SREBF1-215ENST00000487401 ABCG4Q9H172 646 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 GPR27Q9NS67 375 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 GPATCH2LQ9NWQ4 482 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 NCKIPSDQ9NZQ3 722 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 TMEM63CQ9P1W3 806 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 PCSK1NQ9UHG2 260 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 CSNK1G3Q9Y6M4 447 aa12.6□□□□□ -0.39
SREBF1-215ENST00000487401 INSIG1O15503 277 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 SPINT1O43278 529 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 ATMINO43313 823 aaPredicted RBP12.59□□□□□ -0.39
SREBF1-215ENST00000487401 AQP9O43315 295 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms