RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 RANBP9Q96S59 729 aa7.14□□□□□ -1.27
SF3A3-206ENST00000487062 NOTCH4Q99466 2003 aa7.14□□□□□ -1.27
SF3A3-206ENST00000487062 CDCA3Q99618 268 aaPredicted RBP7.14□□□□□ -1.27
SF3A3-206ENST00000487062 SEMA3CQ99985 751 aa7.14□□□□□ -1.27
SF3A3-206ENST00000487062 APOL2Q9BQE5 337 aa7.14□□□□□ -1.27
SF3A3-206ENST00000487062 MGME1Q9BQP7 344 aa7.14□□□□□ -1.27
SF3A3-206ENST00000487062 C2orf49Q9BVC5 232 aaPredicted RBP7.14□□□□□ -1.27
SF3A3-206ENST00000487062 NKX2-4Q9H2Z4 354 aa7.14□□□□□ -1.27
SF3A3-206ENST00000487062 KIF9Q9HAQ2 790 aa7.14□□□□□ -1.27
SF3A3-206ENST00000487062 SLC28A3Q9HAS3 691 aa7.14□□□□□ -1.27
SF3A3-206ENST00000487062 ARNT2Q9HBZ2 717 aa7.14□□□□□ -1.27
SF3A3-206ENST00000487062 MRM3Q9HC36 420 aaKnown RBP7.14□□□□□ -1.27
SF3A3-206ENST00000487062 SSU72Q9NP77 194 aaKnown RBP7.14□□□□□ -1.27
SF3A3-206ENST00000487062 PPANQ9NQ55 473 aaKnown RBP7.14□□□□□ -1.27
SF3A3-206ENST00000487062 TDP1Q9NUW8 608 aa7.14□□□□□ -1.27
SF3A3-206ENST00000487062 INTS9Q9NV88 658 aaKnown RBP7.14□□□□□ -1.27
SF3A3-206ENST00000487062 DZANK1Q9NVP4 752 aa7.14□□□□□ -1.27
SF3A3-206ENST00000487062 PIH1D1Q9NWS0 290 aaKnown RBP7.14□□□□□ -1.27
SF3A3-206ENST00000487062 MOCS1Q9NZB8 636 aa7.14□□□□□ -1.27
SF3A3-206ENST00000487062 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.14□□□□□ -1.27
SF3A3-206ENST00000487062 ZFATQ9P243 1243 aa7.14□□□□□ -1.27
SF3A3-206ENST00000487062 VPS28Q9UK41 221 aa7.14□□□□□ -1.27
SF3A3-206ENST00000487062 SMG5Q9UPR3 1016 aaKnown RBP7.14□□□□□ -1.27
SF3A3-206ENST00000487062 MRPS23Q9Y3D9 190 aaKnown RBP7.14□□□□□ -1.27
SF3A3-206ENST00000487062 DOCK6Q96HP0 2047 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 CXorf51AA0A1B0GTR3 108 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 TMEM120BA0PK00 339 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 HEATR9A2RTY3 570 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 FAM47DPA6NHR8 397 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 CCDC85CA6NKD9 419 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 SCAMP3O14828 347 aaKnown RBP7.13□□□□□ -1.27
SF3A3-206ENST00000487062 PRPF4O43172 522 aaKnown RBP eCLIP7.13□□□□□ -1.27
SF3A3-206ENST00000487062 MOSPD3O75425 235 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 ZWINTO95229 277 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 FGF1P05230 155 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 TPH1P17752 444 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 CA4P22748 312 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 LSP1P33241 339 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 NRIP1P48552 1158 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 SLC18A1P54219 525 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 NTHL1P78549 312 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 ZXDBP98169 803 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 GUCY1A3Q02108 690 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 CDK18Q07002 472 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 SLC20A2Q08357 652 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 NIPAL4Q0D2K0 466 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 USP4Q13107 963 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 DNAJC3Q13217 504 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 SLC1A5Q15758 541 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 SEPT7Q16181 437 aaKnown RBP7.13□□□□□ -1.27
SF3A3-206ENST00000487062 RALGPS1Q5JS13 557 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 SWT1Q5T5J6 900 aaKnown RBP7.13□□□□□ -1.27
SF3A3-206ENST00000487062 GRTP1Q5TC63 336 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 ZNF697Q5TEC3 545 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 FYB2Q5VWT5 728 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 PDPK2PQ6A1A2 396 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 DESI1Q6ICB0 168 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 DENND5AQ6IQ26 1287 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 PKN3Q6P5Z2 889 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 TRMT10BQ6PF06 316 aaKnown RBP7.13□□□□□ -1.27
SF3A3-206ENST00000487062 TPGS1Q6ZTW0 290 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 NLRP9Q7RTR0 991 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 ADGRD2Q7Z7M1 963 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 KCNMB4Q86W47 210 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 RASSF3Q86WH2 238 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 PGBD5Q8N414 524 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 SLC25A41Q8N5S1 370 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 KIAA1958Q8N8K9 716 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 OR52K2Q8NGK3 314 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 FIBINQ8TAL6 211 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 ARRDC2Q8TBH0 407 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 USP13Q92995 863 aaPredicted RBP7.13□□□□□ -1.27
SF3A3-206ENST00000487062 TADA1Q96BN2 335 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 ZNF707Q96C28 371 aaPredicted RBP7.13□□□□□ -1.27
SF3A3-206ENST00000487062 ZNF419Q96HQ0 510 aaPredicted RBP7.13□□□□□ -1.27
SF3A3-206ENST00000487062 SGSM3Q96HU1 749 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 CPNE1Q99829 537 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 FEM1AQ9BSK4 669 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 KIFC1Q9BW19 673 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 PBX4Q9BYU1 374 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 SFXN1Q9H9B4 322 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 CERS4Q9HA82 394 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 PLAC1Q9HBJ0 212 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 SCUBE2Q9NQ36 999 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 TCAF1Q9Y4C2 921 aa7.13□□□□□ -1.27
SF3A3-206ENST00000487062 C2orf16Q68DN1 1984 aa7.12□□□□□ -1.27
SF3A3-206ENST00000487062 LOC285095A0A1B0GVY8 99 aa7.12□□□□□ -1.27
SF3A3-206ENST00000487062 CXorf49A8MYA2 514 aaPredicted RBP7.12□□□□□ -1.27
SF3A3-206ENST00000487062 TRIM49D1C9J1S8 452 aa7.12□□□□□ -1.27
SF3A3-206ENST00000487062 INSIG1O15503 277 aa7.12□□□□□ -1.27
SF3A3-206ENST00000487062 TMCC1O94876 653 aa7.12□□□□□ -1.27
SF3A3-206ENST00000487062 PAPLNO95428 1278 aa7.12□□□□□ -1.27
SF3A3-206ENST00000487062 NDST3O95803 873 aa7.12□□□□□ -1.27
SF3A3-206ENST00000487062 C1QAP02745 245 aa7.12□□□□□ -1.27
SF3A3-206ENST00000487062 MMP2P08253 660 aa7.12□□□□□ -1.27
SF3A3-206ENST00000487062 ALADP13716 330 aa7.12□□□□□ -1.27
SF3A3-206ENST00000487062 CEBPBP17676 345 aa7.12□□□□□ -1.27
SF3A3-206ENST00000487062 KRT4P19013 534 aa7.12□□□□□ -1.27
SF3A3-206ENST00000487062 GLDCP23378 1020 aa7.12□□□□□ -1.27
SF3A3-206ENST00000487062 MZF1P28698 734 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms