RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 ACTR5Q9H9F9 607 aaPredicted RBP8.65□□□□□ -1.02
APTX-228ENST00000486724 PRDM8Q9NQV8 689 aa8.65□□□□□ -1.02
APTX-228ENST00000486724 RAB20Q9NX57 234 aa8.65□□□□□ -1.02
APTX-228ENST00000486724 ETAA1Q9NY74 926 aa8.65□□□□□ -1.02
APTX-228ENST00000486724 ARHGAP20Q9P2F6 1191 aa8.65□□□□□ -1.02
APTX-228ENST00000486724 CYTH4Q9UIA0 394 aa8.65□□□□□ -1.02
APTX-228ENST00000486724 PCSK5Q92824 1860 aa8.65□□□□□ -1.02
APTX-228ENST00000486724 HIVEP3Q5T1R4 2406 aa8.65□□□□□ -1.02
APTX-228ENST00000486724 SVILO95425 2214 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 ATP8B3O60423 1300 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 TARSL2A2RTX5 802 aaKnown RBP8.64□□□□□ -1.03
APTX-228ENST00000486724 CTAGE15A4D2H0 777 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 LRRC53A6NM62 1247 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 EFCAB7A8K855 629 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.64□□□□□ -1.03
APTX-228ENST00000486724 GOLGA8KD6RF30 607 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 TULP1O00294 542 aaPredicted RBP8.64□□□□□ -1.03
APTX-228ENST00000486724 CLDN5O00501 218 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 MUSKO15146 869 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 KIF5CO60282 957 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 SIN3BO75182 1162 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 CNTN5O94779 1100 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 LDLRP01130 860 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 HLA-DRAP01903 254 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 KLKB1P03952 638 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 CTAGE8P0CG41 777 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 HLA-FP30511 346 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 MAT2AP31153 395 aaKnown RBP8.64□□□□□ -1.03
APTX-228ENST00000486724 RPIAP49247 311 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 PGFP49763 221 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 LIG3P49916 1009 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 ATP1A2P50993 1020 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 JAM2P57087 298 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 POLR2FP61218 127 aaKnown RBP8.64□□□□□ -1.03
APTX-228ENST00000486724 HNRNPKP61978 463 aaKnown RBP eCLIP8.64□□□□□ -1.03
APTX-228ENST00000486724 CDK17Q00537 523 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 APBA1Q02410 837 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 BIRC3Q13489 604 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 NCOA4Q13772 614 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 SEPT6Q14141 434 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 ESPL1Q14674 2120 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 DRAP1Q14919 205 aaPredicted RBP8.64□□□□□ -1.03
APTX-228ENST00000486724 ZXDCQ2QGD7 858 aaPredicted RBP8.64□□□□□ -1.03
APTX-228ENST00000486724 SETMARQ53H47 684 aaPredicted RBP8.64□□□□□ -1.03
APTX-228ENST00000486724 PERM1Q5SV97 790 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 SMYD5Q6GMV2 418 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 CHST9Q7L1S5 443 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 TRAPPC11Q7Z392 1133 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 CTAGE6Q86UF2 777 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 MMAAQ8IVH4 418 aaKnown RBP8.64□□□□□ -1.03
APTX-228ENST00000486724 APLFQ8IW19 511 aaPredicted RBP8.64□□□□□ -1.03
APTX-228ENST00000486724 CTAGE4Q8IX94 777 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 AHI1Q8N157 1196 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 AADATQ8N5Z0 425 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 C3orf20Q8ND61 904 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 ZNF548Q8NEK5 533 aaPredicted RBP8.64□□□□□ -1.03
APTX-228ENST00000486724 CPT1CQ8TCG5 803 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 SYN2Q92777 582 aaPredicted RBP8.64□□□□□ -1.03
APTX-228ENST00000486724 SEMA4DQ92854 862 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 IFT43Q96FT9 208 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 NT5C1BQ96P26 610 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 KCNK16Q96T55 309 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 BAG1Q99933 345 aaPredicted RBP8.64□□□□□ -1.03
APTX-228ENST00000486724 CCDC3Q9BQI4 270 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 CALN1Q9BXU9 219 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 DCLK3Q9C098 648 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 FBXO44Q9H4M3 255 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 ANKZF1Q9H8Y5 726 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 PREBQ9HCU5 417 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 DMAP1Q9NPF5 467 aaPredicted RBP8.64□□□□□ -1.03
APTX-228ENST00000486724 NLRC4Q9NPP4 1024 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 FOXJ2Q9P0K8 574 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 SALL4Q9UJQ4 1053 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 AJAP1Q9UKB5 411 aaPredicted RBP8.64□□□□□ -1.03
APTX-228ENST00000486724 TP53TG5Q9Y2B4 290 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 LOXL2Q9Y4K0 774 aa8.64□□□□□ -1.03
APTX-228ENST00000486724 CCDC168Q8NDH2 2452 aa8.63□□□□□ -1.03
APTX-228ENST00000486724 TDRD6O60522 2096 aaKnown RBP8.63□□□□□ -1.03
APTX-228ENST00000486724 ARHGAP10A1A4S6 786 aa8.63□□□□□ -1.03
APTX-228ENST00000486724 TTLL8A6PVC2 850 aa8.63□□□□□ -1.03
APTX-228ENST00000486724 ZNF891A8MT65 544 aaPredicted RBP8.63□□□□□ -1.03
APTX-228ENST00000486724 D6RAR5 112 aa8.63□□□□□ -1.03
APTX-228ENST00000486724 F8VZ95 297 aa8.63□□□□□ -1.03
APTX-228ENST00000486724 STMND1H3BQB6 276 aa8.63□□□□□ -1.03
APTX-228ENST00000486724 NTN3O00634 580 aaPredicted RBP8.63□□□□□ -1.03
APTX-228ENST00000486724 MDM4O15151 490 aa8.63□□□□□ -1.03
APTX-228ENST00000486724 CASC3O15234 703 aaKnown RBP8.63□□□□□ -1.03
APTX-228ENST00000486724 RNGTTO60942 597 aaKnown RBP8.63□□□□□ -1.03
APTX-228ENST00000486724 PHACTR2O75167 634 aa8.63□□□□□ -1.03
APTX-228ENST00000486724 STAU1O95793 577 aaKnown RBP8.63□□□□□ -1.03
APTX-228ENST00000486724 ADH1BP00325 375 aa8.63□□□□□ -1.03
APTX-228ENST00000486724 ASS1P00966 412 aaKnown RBP8.63□□□□□ -1.03
APTX-228ENST00000486724 CCDC175P0C221 793 aa8.63□□□□□ -1.03
APTX-228ENST00000486724 PTPN1P18031 435 aaKnown RBP8.63□□□□□ -1.03
APTX-228ENST00000486724 PSMD8P48556 350 aa8.63□□□□□ -1.03
APTX-228ENST00000486724 FNTAP49354 379 aa8.63□□□□□ -1.03
APTX-228ENST00000486724 GCNT1Q02742 428 aa8.63□□□□□ -1.03
APTX-228ENST00000486724 FGL2Q14314 439 aa8.63□□□□□ -1.03
APTX-228ENST00000486724 TSR1Q2NL82 804 aaKnown RBP8.63□□□□□ -1.03
APTX-228ENST00000486724 HNRNPA1L2Q32P51 320 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms