RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 KRT23Q9C075 422 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 CCSER1Q9C0I3 900 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 B3GNT4Q9C0J1 378 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 BHMT2Q9H2M3 363 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 MID1IP1Q9NPA3 183 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 ARHGEF3Q9NR81 526 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 SNTG1Q9NSN8 517 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 KIF17Q9P2E2 1029 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 ADD3Q9UEY8 706 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 CD300AQ9UGN4 299 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 TSPYL4Q9UJ04 414 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 ADAM21Q9UKJ8 722 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 POLHQ9Y253 713 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 STK38LQ9Y2H1 464 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 TBC1D30Q9Y2I9 924 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 C15orf41Q9Y2V0 281 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 CBY1Q9Y3M2 126 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 PCDHGB6Q9Y5F9 930 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 ATP8B3O60423 1300 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 ROCK1Q13464 1354 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 ERCC6Q03468 1493 aa4.34□□□□□ -1.71
R3HDM1-217ENST00000486532 DISP3Q9P2K9 1392 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 WDR19Q8NEZ3 1342 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 A0A1B0GUA9 196 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 hCG_1807616A0A1W2PRN6 198 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 TARSL2A2RTX5 802 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 RHPN2P1A8MT19 583 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 TISP43B9A030 160 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 B9A039 149 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 STMND1H3BQB6 276 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 PDLIM1O00151 329 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 E2F3O00716 465 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 NDUFAB1O14561 156 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 LSM1O15116 133 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 NPC1O15118 1278 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 ZC3H11AO75152 810 aaKnown RBP eCLIP4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 ONECUT2O95948 504 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 KRT14P02533 472 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 AFPP02771 609 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 TROVE2P10155 538 aaKnown RBP eCLIP4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 HSPA8P11142 646 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 XRCC6P12956 609 aaKnown RBP eCLIP4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 KRT5P13647 590 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 DNAJB1P25685 340 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 PEX2P28328 305 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 AKT1P31749 480 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 IDUAP35475 653 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 HNF1BP35680 557 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 HAAOP46952 286 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 CPA2P48052 419 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 PRIM2P49643 509 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 DIO1P49895 249 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 TUBP50607 506 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 SLC12A3P55017 1021 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 NR1H2P55055 460 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 CASP6P55212 293 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 STARD6P59095 220 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 EIF4A1P60842 406 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 B2MP61769 119 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 YWHAZP63104 245 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 NOP14P78316 857 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 MC2RQ01718 297 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 LRMPQ12912 555 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 MTX1Q13505 466 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 EFR3AQ14156 821 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 AAK1Q2M2I8 961 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 FLYWCH1Q4VC44 716 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 CEP78Q5JTW2 689 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 FAM209BQ5JX69 171 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 RNASEH2BQ5TBB1 312 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 THEMIS2Q5TEJ8 643 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 NDUFAF5Q5TEU4 345 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 C11orf87Q6NUJ2 197 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 ERICH5Q6P6B1 374 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 KLHL24Q6TFL4 600 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 SASS6Q6UVJ0 657 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 PET117Q6UWS5 81 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 ZNF771Q7L3S4 317 aaPredicted RBP4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 NLRP9Q7RTR0 991 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 SPATA21Q7Z572 469 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 R3HCC1LQ7Z5L2 792 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 TAF8Q7Z7C8 310 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 NEK8Q86SG6 692 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 FAM160B2Q86V87 743 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 ZBTB34Q8NCN2 500 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 NSUN7Q8NE18 718 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 SPATA20Q8TB22 786 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 DDI1Q8WTU0 396 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 SLC5A11Q8WWX8 675 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 JADE3Q92613 823 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 HTRA1Q92743 480 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 RFKQ969G6 155 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 FAM149B1Q96BN6 582 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 INTS12Q96CB8 462 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 DTNBP1Q96EV8 351 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 SNF8Q96H20 258 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 DACH2Q96NX9 599 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 SIKE1Q9BRV8 207 aa4.33□□□□□ -1.72
R3HDM1-217ENST00000486532 HAUS8Q9BT25 410 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms