RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 TLK1Q9UKI8 766 aa20.58■□□□□ 0.89
HPS3-206ENST00000486530 KIAA0100Q14667 2235 aaKnown RBP20.58■□□□□ 0.88
HPS3-206ENST00000486530 AHSGP02765 367 aa20.58■□□□□ 0.88
HPS3-206ENST00000486530 ATP5BP06576 529 aaKnown RBP20.58■□□□□ 0.88
HPS3-206ENST00000486530 APOA4P06727 396 aa20.58■□□□□ 0.88
HPS3-206ENST00000486530 DNAJB1P25685 340 aa20.58■□□□□ 0.88
HPS3-206ENST00000486530 ETFBP38117 255 aa20.58■□□□□ 0.88
HPS3-206ENST00000486530 SLC1A6P48664 564 aa20.58■□□□□ 0.88
HPS3-206ENST00000486530 USP10Q14694 798 aaKnown RBP20.58■□□□□ 0.88
HPS3-206ENST00000486530 CTC1Q2NKJ3 1217 aa20.58■□□□□ 0.88
HPS3-206ENST00000486530 RFWD3Q6PCD5 774 aa20.58■□□□□ 0.88
HPS3-206ENST00000486530 KIAA0408Q6ZU52 694 aa20.58■□□□□ 0.88
HPS3-206ENST00000486530 RAPH1Q70E73 1250 aa20.58■□□□□ 0.88
HPS3-206ENST00000486530 CFAP52Q8N1V2 620 aa20.58■□□□□ 0.88
HPS3-206ENST00000486530 KIF2BQ8N4N8 673 aa20.58■□□□□ 0.88
HPS3-206ENST00000486530 C2CD4AQ8NCU7 369 aaPredicted RBP20.58■□□□□ 0.88
HPS3-206ENST00000486530 ACVR1CQ8NER5 493 aa20.58■□□□□ 0.88
HPS3-206ENST00000486530 RAB3IPQ96QF0 476 aaPredicted RBP20.58■□□□□ 0.88
HPS3-206ENST00000486530 ZNF395Q9H8N7 513 aaPredicted RBP20.58■□□□□ 0.88
HPS3-206ENST00000486530 PLXNA4Q9HCM2 1894 aa20.58■□□□□ 0.88
HPS3-206ENST00000486530 UXTQ9UBK9 157 aaPredicted RBP20.58■□□□□ 0.88
HPS3-206ENST00000486530 HAO1Q9UJM8 370 aa20.58■□□□□ 0.88
HPS3-206ENST00000486530 TRIM33Q9UPN9 1127 aa20.58■□□□□ 0.88
HPS3-206ENST00000486530 E2F8A0AVK6 867 aa20.57■□□□□ 0.88
HPS3-206ENST00000486530 CARNS1A5YM72 827 aa20.57■□□□□ 0.88
HPS3-206ENST00000486530 T-ENOLP0DO92 83 aa20.57■□□□□ 0.88
HPS3-206ENST00000486530 GABRB3P28472 473 aa20.57■□□□□ 0.88
HPS3-206ENST00000486530 SLC1A2P43004 574 aa20.57■□□□□ 0.88
HPS3-206ENST00000486530 MPP1Q00013 466 aa20.57■□□□□ 0.88
HPS3-206ENST00000486530 IRF9Q00978 393 aa20.57■□□□□ 0.88
HPS3-206ENST00000486530 GNA12Q03113 381 aa20.57■□□□□ 0.88
HPS3-206ENST00000486530 SLC20A2Q08357 652 aa20.57■□□□□ 0.88
HPS3-206ENST00000486530 VEPH1Q14D04 833 aa20.57■□□□□ 0.88
HPS3-206ENST00000486530 TAF12Q16514 161 aa20.57■□□□□ 0.88
HPS3-206ENST00000486530 TSTD2Q5T7W7 516 aa20.57■□□□□ 0.88
HPS3-206ENST00000486530 DENND6AQ8IWF6 608 aa20.57■□□□□ 0.88
HPS3-206ENST00000486530 TMEM199Q8N511 208 aa20.57■□□□□ 0.88
HPS3-206ENST00000486530 CALML6Q8TD86 181 aa20.57■□□□□ 0.88
HPS3-206ENST00000486530 SREK1Q8WXA9 508 aaKnown RBP20.57■□□□□ 0.88
HPS3-206ENST00000486530 TSNARE1Q96NA8 513 aa20.57■□□□□ 0.88
HPS3-206ENST00000486530 MCOLN1Q9GZU1 580 aa20.57■□□□□ 0.88
HPS3-206ENST00000486530 NMRAL1Q9HBL8 299 aa20.57■□□□□ 0.88
HPS3-206ENST00000486530 ZFP37Q9Y6Q3 630 aaPredicted RBP20.57■□□□□ 0.88
HPS3-206ENST00000486530 NUMBLQ9Y6R0 609 aa20.57■□□□□ 0.88
HPS3-206ENST00000486530 LOC285095A0A1B0GVY8 99 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 EFCAB14O75071 495 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 RALBP11234 206 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 LAG3P18627 525 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 CORO1AP31146 461 aaKnown RBP20.56■□□□□ 0.88
HPS3-206ENST00000486530 GMPRP36959 345 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 PPP3CCP48454 512 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 CTBP1Q13363 440 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 MSLNQ13421 630 aaPredicted RBP20.56■□□□□ 0.88
HPS3-206ENST00000486530 FAM91A1Q658Y4 838 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 ZNF470Q6ECI4 717 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 DENND1CQ8IV53 801 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 WDR75Q8IWA0 830 aaKnown RBP20.56■□□□□ 0.88
HPS3-206ENST00000486530 BBS5Q8N3I7 341 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 PIWIL2Q8TC59 973 aaKnown RBP20.56■□□□□ 0.88
HPS3-206ENST00000486530 PPP4R1Q8TF05 950 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 SEMA3CQ99985 751 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 LNPEPQ9UIQ6 1025 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 MKI67P46013 3256 aaKnown RBP20.56■□□□□ 0.88
HPS3-206ENST00000486530 TRAFD1O14545 582 aaPredicted RBP20.56■□□□□ 0.88
HPS3-206ENST00000486530 CLDN11O75508 207 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 STC2O76061 302 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 CBX6O95503 412 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 URODP06132 367 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 KRT16P08779 473 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 KITP10721 976 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 COL6A2P12110 1019 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 HOXD9P28356 352 aaPredicted RBP20.56■□□□□ 0.88
HPS3-206ENST00000486530 CD151P48509 253 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 PLD1Q13393 1074 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 SLC12A1Q13621 1099 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 BTG3Q14201 252 aaPredicted RBP20.56■□□□□ 0.88
HPS3-206ENST00000486530 IHHQ14623 411 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 SIRPB2Q5JXA9 342 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 ALG1LQ6GMV1 187 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 NEPROQ6NW34 567 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 CMTR2Q8IYT2 770 aaKnown RBP20.56■□□□□ 0.88
HPS3-206ENST00000486530 RDH11Q8TC12 318 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 FEM1CQ96JP0 617 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 TMEM237Q96Q45 408 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 FBXO6Q9NRD1 293 aaPredicted RBP20.56■□□□□ 0.88
HPS3-206ENST00000486530 MARCOQ9UEW3 520 aaPredicted RBP20.56■□□□□ 0.88
HPS3-206ENST00000486530 FBXO5Q9UKT4 447 aa20.56■□□□□ 0.88
HPS3-206ENST00000486530 FAM95CA0A1B0GW59 222 aa20.55■□□□□ 0.88
HPS3-206ENST00000486530 C2orf71A6NGG8 1288 aa20.55■□□□□ 0.88
HPS3-206ENST00000486530 H3BNC9 293 aa20.55■□□□□ 0.88
HPS3-206ENST00000486530 ITM2AO43736 263 aa20.55■□□□□ 0.88
HPS3-206ENST00000486530 H2AFYO75367 372 aaKnown RBP20.55■□□□□ 0.88
HPS3-206ENST00000486530 ATXN1LP0C7T5 689 aaKnown RBP20.55■□□□□ 0.88
HPS3-206ENST00000486530 AQP5P55064 265 aa20.55■□□□□ 0.88
HPS3-206ENST00000486530 RAB33AQ14088 237 aa20.55■□□□□ 0.88
HPS3-206ENST00000486530 KRT72Q14CN4 511 aa20.55■□□□□ 0.88
HPS3-206ENST00000486530 SNCBQ16143 134 aa20.55■□□□□ 0.88
HPS3-206ENST00000486530 CHST9Q7L1S5 443 aa20.55■□□□□ 0.88
HPS3-206ENST00000486530 OR6Y1Q8NGX8 325 aa20.55■□□□□ 0.88
HPS3-206ENST00000486530 PRICKLE1Q96MT3 831 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms