RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 C22orf39Q6P5X5 142 aa15.45■□□□□ 0.06
U2AF1-211ENST00000486519 LVRNQ6Q4G3 990 aa15.45■□□□□ 0.06
U2AF1-211ENST00000486519 BRAPQ7Z569 592 aa15.45■□□□□ 0.06
U2AF1-211ENST00000486519 FSTL5Q8N475 847 aaPredicted RBP15.45■□□□□ 0.06
U2AF1-211ENST00000486519 KIAA0895Q8NCT3 520 aa15.45■□□□□ 0.06
U2AF1-211ENST00000486519 PRR7Q8TB68 274 aa15.45■□□□□ 0.06
U2AF1-211ENST00000486519 SLC35F5Q8WV83 523 aa15.45■□□□□ 0.06
U2AF1-211ENST00000486519 IRGQQ8WZA9 623 aa15.45■□□□□ 0.06
U2AF1-211ENST00000486519 STARD8Q92502 1023 aa15.45■□□□□ 0.06
U2AF1-211ENST00000486519 RNF34Q969K3 372 aa15.45■□□□□ 0.06
U2AF1-211ENST00000486519 VOPP1Q96AW1 172 aa15.45■□□□□ 0.06
U2AF1-211ENST00000486519 DHX58Q96C10 678 aa15.45■□□□□ 0.06
U2AF1-211ENST00000486519 POM121Q96HA1 1249 aa15.45■□□□□ 0.06
U2AF1-211ENST00000486519 C7orf25Q9BPX7 421 aa15.45■□□□□ 0.06
U2AF1-211ENST00000486519 SPRY4Q9C004 299 aa15.45■□□□□ 0.06
U2AF1-211ENST00000486519 UNKQ9C0B0 810 aaKnown RBP15.45■□□□□ 0.06
U2AF1-211ENST00000486519 ZSCAN16Q9H4T2 348 aaPredicted RBP15.45■□□□□ 0.06
U2AF1-211ENST00000486519 LRIT1Q9P2V4 623 aa15.45■□□□□ 0.06
U2AF1-211ENST00000486519 ACTL7AQ9Y615 435 aa15.45■□□□□ 0.06
U2AF1-211ENST00000486519 AP1G1O43747 822 aa15.44■□□□□ 0.06
U2AF1-211ENST00000486519 CD19P15391 556 aa15.44■□□□□ 0.06
U2AF1-211ENST00000486519 GLB1P16278 677 aa15.44■□□□□ 0.06
U2AF1-211ENST00000486519 ITIH2P19823 946 aa15.44■□□□□ 0.06
U2AF1-211ENST00000486519 F8A1P23610 371 aa15.44■□□□□ 0.06
U2AF1-211ENST00000486519 MPSTP25325 297 aa15.44■□□□□ 0.06
U2AF1-211ENST00000486519 L1CAMP32004 1257 aa15.44■□□□□ 0.06
U2AF1-211ENST00000486519 NUCB2P80303 420 aa15.44■□□□□ 0.06
U2AF1-211ENST00000486519 NNTQ13423 1086 aa15.44■□□□□ 0.06
U2AF1-211ENST00000486519 HLTFQ14527 1009 aaKnown RBP eCLIP15.44■□□□□ 0.06
U2AF1-211ENST00000486519 ELOCQ15369 112 aa15.44■□□□□ 0.06
U2AF1-211ENST00000486519 ANKS6Q68DC2 871 aa15.44■□□□□ 0.06
U2AF1-211ENST00000486519 CCDC13Q8IYE1 715 aa15.44■□□□□ 0.06
U2AF1-211ENST00000486519 TP53I13Q8NBR0 393 aaPredicted RBP15.44■□□□□ 0.06
U2AF1-211ENST00000486519 DENND6BQ8NEG7 585 aa15.44■□□□□ 0.06
U2AF1-211ENST00000486519 BTN2A3PQ96KV6 586 aa15.44■□□□□ 0.06
U2AF1-211ENST00000486519 TMEM9Q9P0T7 183 aa15.44■□□□□ 0.06
U2AF1-211ENST00000486519 HESX1Q9UBX0 185 aa15.44■□□□□ 0.06
U2AF1-211ENST00000486519 TLK1Q9UKI8 766 aa15.44■□□□□ 0.06
U2AF1-211ENST00000486519 ARHGAP10A1A4S6 786 aa15.43■□□□□ 0.06
U2AF1-211ENST00000486519 IGLV3-25P01717 112 aa15.43■□□□□ 0.06
U2AF1-211ENST00000486519 APOEP02649 317 aa15.43■□□□□ 0.06
U2AF1-211ENST00000486519 SETSIPP0DME0 302 aa15.43■□□□□ 0.06
U2AF1-211ENST00000486519 CTSEP14091 401 aa15.43■□□□□ 0.06
U2AF1-211ENST00000486519 CCDC15Q0P6D6 951 aa15.43■□□□□ 0.06
U2AF1-211ENST00000486519 SEPT6Q14141 434 aa15.43■□□□□ 0.06
U2AF1-211ENST00000486519 IRF4Q15306 451 aa15.43■□□□□ 0.06
U2AF1-211ENST00000486519 CCL4L1Q8NHW4 92 aa15.43■□□□□ 0.06
U2AF1-211ENST00000486519 PDXPQ96GD0 296 aa15.43■□□□□ 0.06
U2AF1-211ENST00000486519 FARP1Q9Y4F1 1045 aaPredicted RBP15.43■□□□□ 0.06
U2AF1-211ENST00000486519 A0A0D9SEW6 157 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 KCNU1A8MYU2 1149 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 B4DGG1 531 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 M0QYT0 321 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 DNAJB5O75953 348 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 ALPIP09923 528 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 MAZP56270 477 aaKnown RBP15.42■□□□□ 0.06
U2AF1-211ENST00000486519 STK4Q13043 487 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 EIF4EBP2Q13542 120 aaPredicted RBP15.42■□□□□ 0.06
U2AF1-211ENST00000486519 CUL4BQ13620 913 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 C14orf28Q4W4Y0 310 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 OGFOD3Q6PK18 319 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 PIM3Q86V86 326 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 GKN2Q86XP6 184 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 GRAMD1CQ8IYS0 662 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 OR6K2Q8NGY2 324 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 SCG3Q8WXD2 468 aaKnown RBP15.42■□□□□ 0.06
U2AF1-211ENST00000486519 ASB12Q8WXK4 309 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 MARVELD3Q96A59 401 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 RPRD1AQ96P16 312 aaPredicted RBP15.42■□□□□ 0.06
U2AF1-211ENST00000486519 CTRCQ99895 268 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 SLC39A1Q9NY26 324 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 LUZP4Q9P127 313 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 DKK3Q9UBP4 350 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 VANGL2Q9ULK5 521 aa15.42■□□□□ 0.06
U2AF1-211ENST00000486519 MKRN2OSH3BPM6 223 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 MMP20O60882 483 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 SORBS2O94875 1100 aaKnown RBP15.41■□□□□ 0.06
U2AF1-211ENST00000486519 CPNE6O95741 557 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 PNLIPP16233 465 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 TCN2P20062 427 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 PDCP20941 246 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 CSF2RBP32927 897 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 YPEL5P62699 121 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 DPYDQ12882 1025 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 NKAIN2Q5VXU1 208 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 FOXR2Q6PJQ5 311 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 ENPP7Q6UWV6 458 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 OR6C4Q8NGE1 309 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 TMEM174Q8WUU8 243 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 FAM149B1Q96BN6 582 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 PPP1R16AQ96I34 528 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 TMX3Q96JJ7 454 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 DDA1Q9BW61 102 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 SRRTQ9BXP5 876 aaKnown RBP15.41■□□□□ 0.06
U2AF1-211ENST00000486519 MUC3BQ9H195 1237 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 COQ6Q9Y2Z9 468 aa15.41■□□□□ 0.06
U2AF1-211ENST00000486519 PCNX1Q96RV3 2341 aa15.4■□□□□ 0.06
U2AF1-211ENST00000486519 HGSO14964 777 aaPredicted RBP15.4■□□□□ 0.06
U2AF1-211ENST00000486519 CAPN5O15484 640 aaPredicted RBP15.4■□□□□ 0.06
U2AF1-211ENST00000486519 TSPAN6O43657 245 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms