RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 NPNTQ6UXI9 565 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 LEKR1Q6ZMV7 388 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 MEX3BQ6ZN04 569 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 CACNA2D4Q7Z3S7 1137 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 R3HCC1LQ7Z5L2 792 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 FAM160B2Q86V87 743 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 MOGAT3Q86VF5 341 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 TMEM200AQ86VY9 491 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 METTL23Q86XA0 190 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 CPOQ8IVL8 374 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 CCDC105Q8IYK2 499 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 ARL14Q8N4G2 192 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 NIPA2Q8N8Q9 360 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 C2orf69Q8N8R5 385 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 GSTCDQ8NEC7 633 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 IFI44Q8TCB0 444 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 ST8SIA4Q92187 359 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 TBC1D5Q92609 795 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 PTPRN2Q92932 1015 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 MVB12AQ96EY5 273 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 PNKPQ96T60 521 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 DDX50Q9BQ39 737 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 SIKE1Q9BRV8 207 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 TSGA10Q9BZW7 698 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 B3GNT4Q9C0J1 378 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 ZMYND12Q9H0C1 365 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 DPH5Q9H2P9 285 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 SMARCAD1Q9H4L7 1026 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 EPS8L2Q9H6S3 715 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 DNAJC18Q9H819 358 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 HPS4Q9NQG7 708 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 TOMM22Q9NS69 142 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 BARHL2Q9NY43 387 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 RNF14Q9UBS8 474 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 ATPIF1Q9UII2 106 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 ADAM21Q9UKJ8 722 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 KLHL20Q9Y2M5 609 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 TESMINQ9Y4I5 508 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 PCDHGA1Q9Y5H4 931 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 COL5A3P25940 1745 aaPredicted RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 COL24A1Q17RW2 1714 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 DOT1LQ8TEK3 1739 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 SPATA31A1Q5TZJ5 1347 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 FAM205AQ6ZU69 1335 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 MYH14Q7Z406 1995 aaKnown RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 COL4A1P02462 1669 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 TNRC6CQ9HCJ0 1690 aaKnown RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 MYH2Q9UKX2 1941 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 PVALEFA0A1B0GWK0 134 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 SLC12A8A0AV02 714 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 ACOD1A6NK06 481 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 ZNF839A8K0R7 811 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 H3BQF6 201 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 SMIM22K7EJ46 135 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 VWA5AO00534 786 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 ACKR2O00590 384 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 MAN2B1O00754 1011 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 NPC1O15118 1278 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 WDR46O15213 610 aaKnown RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 SMAD6O43541 496 aaKnown RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 KRT86O43790 486 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 CYP7B1O75881 506 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 ALDH1A2O94788 518 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 PRPF6O94906 941 aaKnown RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 ENO2P09104 434 aaPredicted RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 KRT5P13647 590 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 TGM1P22735 817 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 SP100P23497 879 aaPredicted RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 GNA11P29992 359 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 TLX1P31314 330 aaPredicted RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 HIBADHP31937 336 aaKnown RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 MAP2K2P36507 400 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 STAT6P42226 847 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 ACAA2P42765 397 aaKnown RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 GYG1P46976 350 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 CPA2P48052 419 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 SELENOPP49908 381 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 CCT8P50990 548 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 CCR9P51686 369 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 CCNHP51946 323 aaPredicted RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 MNAT1P51948 309 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 KPNA1P52294 538 aaPredicted RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 VAV2P52735 878 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 RAD23AP54725 363 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 EPHA5P54756 1037 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 SCAND1P57086 179 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 YBEYP58557 167 aaPredicted RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 TGFB2P61812 414 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 RPS8P62241 208 aaKnown RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 HERVK_113P62684 666 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 VSNL1P62760 191 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 DYNLL1P63167 89 aaKnown RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 GSTO1P78417 241 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 KCNJ10P78508 379 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 ZNF543Q08ER8 600 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 STK4Q13043 487 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 RPA4Q13156 261 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 DHX34Q14147 1143 aaKnown RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 TRADDQ15628 312 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms