RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 CASQ1P31415 396 aa20.16■□□□□ 0.82
COL6A2-208ENST00000485591 TPMTP51580 245 aa20.16■□□□□ 0.82
COL6A2-208ENST00000485591 METAP1P53582 386 aa20.16■□□□□ 0.82
COL6A2-208ENST00000485591 SFSWAPQ12872 951 aaKnown RBP20.16■□□□□ 0.82
COL6A2-208ENST00000485591 CCNG2Q16589 344 aa20.16■□□□□ 0.82
COL6A2-208ENST00000485591 NCEH1Q6PIU2 408 aa20.16■□□□□ 0.82
COL6A2-208ENST00000485591 KBTBD6Q86V97 674 aa20.16■□□□□ 0.82
COL6A2-208ENST00000485591 AADATQ8N5Z0 425 aa20.16■□□□□ 0.82
COL6A2-208ENST00000485591 FAM131CQ96AQ9 280 aa20.16■□□□□ 0.82
COL6A2-208ENST00000485591 PPP1R16AQ96I34 528 aa20.16■□□□□ 0.82
COL6A2-208ENST00000485591 TEKT5Q96M29 485 aa20.16■□□□□ 0.82
COL6A2-208ENST00000485591 SEMA3CQ99985 751 aa20.16■□□□□ 0.82
COL6A2-208ENST00000485591 C10orf88Q9H8K7 445 aa20.16■□□□□ 0.82
COL6A2-208ENST00000485591 USP29Q9HBJ7 922 aa20.16■□□□□ 0.82
COL6A2-208ENST00000485591 CD93Q9NPY3 652 aa20.16■□□□□ 0.82
COL6A2-208ENST00000485591 TTLL3Q9Y4R7 772 aa20.16■□□□□ 0.82
COL6A2-208ENST00000485591 PCDHGA2Q9Y5H1 932 aa20.16■□□□□ 0.82
COL6A2-208ENST00000485591 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.15■□□□□ 0.82
COL6A2-208ENST00000485591 CFAP69A5D8W1 941 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 KCNN4O15554 427 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 UGT2B4P06133 528 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 ITGB7P26010 798 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 SERPINA4P29622 427 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 DRD3P35462 400 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 P2RY2P41231 377 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 ITKQ08881 620 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 TCF15Q12870 199 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 BYSLQ13895 437 aaKnown RBP20.15■□□□□ 0.82
COL6A2-208ENST00000485591 OASLQ15646 514 aaKnown RBP20.15■□□□□ 0.82
COL6A2-208ENST00000485591 MAP7D1Q3KQU3 841 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 USP39Q53GS9 565 aaKnown RBP20.15■□□□□ 0.82
COL6A2-208ENST00000485591 ZNF805Q5CZA5 627 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 DRICH1Q6PGQ1 229 aaPredicted RBP20.15■□□□□ 0.82
COL6A2-208ENST00000485591 GDPD4Q6W3E5 623 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 ZSCAN30Q86W11 494 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 ZNF567Q8N184 647 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 ARRDC2Q8TBH0 407 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 C1orf54Q8WWF1 131 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 ARRDC3Q96B67 414 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 SPACA7Q96KW9 195 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 ZNF641Q96N77 438 aaPredicted RBP20.15■□□□□ 0.82
COL6A2-208ENST00000485591 AGAP3Q96P47 875 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 ATP13A3Q9H7F0 1226 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 NOD2Q9HC29 1040 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 HOMER3Q9NSC5 361 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 FBXL12Q9NXK8 326 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 KLHL8Q9P2G9 620 aaPredicted RBP20.15■□□□□ 0.82
COL6A2-208ENST00000485591 TRHDEQ9UKU6 1024 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 FZD4Q9ULV1 537 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 CEP192Q8TEP8 1941 aa20.15■□□□□ 0.82
COL6A2-208ENST00000485591 A0A1W2PP55 124 aa20.14■□□□□ 0.81
COL6A2-208ENST00000485591 TTC24A2A3L6 582 aaPredicted RBP20.14■□□□□ 0.81
COL6A2-208ENST00000485591 LILRB5O75023 590 aa20.14■□□□□ 0.81
COL6A2-208ENST00000485591 STK10O94804 968 aaKnown RBP20.14■□□□□ 0.81
COL6A2-208ENST00000485591 PIGNO95427 931 aa20.14■□□□□ 0.81
COL6A2-208ENST00000485591 TUBB4AP04350 444 aa20.14■□□□□ 0.81
COL6A2-208ENST00000485591 CNR2P34972 360 aa20.14■□□□□ 0.81
COL6A2-208ENST00000485591 DSC2Q02487 901 aa20.14■□□□□ 0.81
COL6A2-208ENST00000485591 BCL2L1Q07817 233 aa20.14■□□□□ 0.81
COL6A2-208ENST00000485591 POM121L1PQ3SYA9 428 aa20.14■□□□□ 0.81
COL6A2-208ENST00000485591 HDDC3Q8N4P3 179 aa20.14■□□□□ 0.81
COL6A2-208ENST00000485591 PRELID2Q8N945 189 aa20.14■□□□□ 0.81
COL6A2-208ENST00000485591 NSMCE3Q96MG7 304 aa20.14■□□□□ 0.81
COL6A2-208ENST00000485591 OMDQ99983 421 aa20.14■□□□□ 0.81
COL6A2-208ENST00000485591 DYRK4Q9NR20 520 aa20.14■□□□□ 0.81
COL6A2-208ENST00000485591 SMARCAL1Q9NZC9 954 aa20.14■□□□□ 0.81
COL6A2-208ENST00000485591 SERGEFQ9UGK8 458 aa20.14■□□□□ 0.81
COL6A2-208ENST00000485591 CYP8B1Q9UNU6 501 aa20.14■□□□□ 0.81
COL6A2-208ENST00000485591 NCKAP1Q9Y2A7 1128 aa20.14■□□□□ 0.81
COL6A2-208ENST00000485591 IGHV1OR15-9A0A0B4J2B8 117 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 TSPAN11A1L157 253 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 H0Y858 1186 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 KIF2AO00139 706 aaPredicted RBP20.13■□□□□ 0.81
COL6A2-208ENST00000485591 SLC7A4O43246 635 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 SOCS5O75159 536 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 RNASEH2AO75792 299 aaKnown RBP20.13■□□□□ 0.81
COL6A2-208ENST00000485591 ITGAVP06756 1048 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 OXTRP30559 389 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 NIPAL4Q0D2K0 466 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 CNTN1Q12860 1018 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 CAMK1DQ8IU85 385 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 CREG2Q8IUH2 290 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 HCAR2Q8TDS4 363 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 GAB3Q8WWW8 586 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 RLN3Q8WXF3 142 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 KLHL32Q96NJ5 620 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 TMEM121Q9BTD3 319 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 HDAC8Q9BY41 377 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 IRF2BPLQ9H1B7 796 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 SLC25A51Q9H1U9 297 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 SUV39H2Q9H5I1 410 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 GLOD4Q9HC38 313 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 DKK3Q9UBP4 350 aa20.13■□□□□ 0.81
COL6A2-208ENST00000485591 C5orf60A6NFR6 353 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 TRAFD1O14545 582 aaPredicted RBP20.12■□□□□ 0.81
COL6A2-208ENST00000485591 RPP40O75818 363 aaKnown RBP20.12■□□□□ 0.81
COL6A2-208ENST00000485591 SERPINF2P08697 491 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 CD6P30203 668 aa20.12■□□□□ 0.81
COL6A2-208ENST00000485591 STIP1P31948 543 aaKnown RBP20.12■□□□□ 0.81
COL6A2-208ENST00000485591 CD68P34810 354 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms