RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ACACBO00763 2458 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 CD48P09326 243 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 H2AFZP0C0S5 128 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 ZNF883P0CG24 379 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 ITIH2P19823 946 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 PMLP29590 882 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 RGRP47804 291 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 CDH6P55285 790 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 CLDN2P57739 230 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 MMRN1Q13201 1228 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 KRT81Q14533 505 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 STAT4Q14765 748 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 ZNF284Q2VY69 593 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 ATP13A4Q4VNC1 1196 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 BOLA3Q53S33 107 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 INO80DQ53TQ3 878 aaPredicted RBP12.45□□□□□ -0.42
MSH5-216ENST00000484309 SLC45A4Q5BKX6 768 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 ZNF805Q5CZA5 627 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 AFMIDQ63HM1 303 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 GDPD4Q6W3E5 623 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 H2AFVQ71UI9 128 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 POLNQ7Z5Q5 900 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 SPATS2Q86XZ4 545 aaKnown RBP12.45□□□□□ -0.42
MSH5-216ENST00000484309 GATAD2AQ86YP4 633 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 PLPP6Q8IY26 295 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 CASKIN2Q8WXE0 1202 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 SKA1Q96BD8 255 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 CSPG4P5Q96PW8 444 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 CAAP1Q9H8G2 361 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 NHEJ1Q9H9Q4 299 aaPredicted RBP12.45□□□□□ -0.42
MSH5-216ENST00000484309 TPX2Q9ULW0 747 aaKnown RBP12.45□□□□□ -0.42
MSH5-216ENST00000484309 DMTF1Q9Y222 760 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 FADS3Q9Y5Q0 445 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 CEP295Q9C0D2 2601 aa12.45□□□□□ -0.42
MSH5-216ENST00000484309 A0A1B0GTQ1 180 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 SSU72P8A0A1W2PR75 194 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 AKR1B15C9JRZ8 316 aaPredicted RBP12.44□□□□□ -0.42
MSH5-216ENST00000484309 PRAMEF26H0Y7S4 382 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 TLR4O00206 839 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 NEMP1O14524 444 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 SPINT1O43278 529 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 PALMO75781 387 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 HCAR3P49019 387 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 NXPH1P58417 271 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 TAS2R40P59535 323 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 RAD51Q06609 339 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 TBX2Q13207 712 aaPredicted RBP12.44□□□□□ -0.42
MSH5-216ENST00000484309 FGL2Q14314 439 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 TRIP6Q15654 476 aaKnown RBP12.44□□□□□ -0.42
MSH5-216ENST00000484309 TMEM259Q4ZIN3 620 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 TMCO3Q6UWJ1 677 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 KDM7AQ6ZMT4 941 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 MFSD2AQ8NA29 543 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 TSEN2Q8NCE0 465 aaKnown RBP12.44□□□□□ -0.42
MSH5-216ENST00000484309 RHBDD1Q8TEB9 315 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 TEKT4Q8WW24 435 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 LRIG1Q96JA1 1093 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 CCDC42Q96M95 316 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 CNTNAP3BQ96NU0 1288 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 ELF4Q99607 663 aaPredicted RBP12.44□□□□□ -0.42
MSH5-216ENST00000484309 CINPQ9BW66 212 aaPredicted RBP12.44□□□□□ -0.42
MSH5-216ENST00000484309 OSBPL1AQ9BXW6 950 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 CNTNAP3Q9BZ76 1288 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 RBSNQ9H1K0 784 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 GDF3Q9NR23 364 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 DONSONQ9NYP3 566 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 IPO11Q9UI26 975 aaKnown RBP12.44□□□□□ -0.42
MSH5-216ENST00000484309 PCOLCE2Q9UKZ9 415 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 PLXNB3Q9ULL4 1909 aa12.44□□□□□ -0.42
MSH5-216ENST00000484309 LRP4O75096 1905 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 TTC24A2A3L6 582 aaPredicted RBP12.43□□□□□ -0.42
MSH5-216ENST00000484309 IGLON5A6NGN9 336 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 GOLGA8CPA6NN73 597 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 MUSKO15146 869 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 RAD51BO15315 384 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 FLRT2O43155 660 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 CBFA2T3O75081 653 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 PROSCO94903 275 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 PAK4O96013 591 aaPredicted RBP12.43□□□□□ -0.42
MSH5-216ENST00000484309 PRKCGP05129 697 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 TMEM253P0C7T8 217 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 THEGLP0DJG4 465 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 HNRNPA2B1P22626 353 aaKnown RBP12.43□□□□□ -0.42
MSH5-216ENST00000484309 AKT2P31751 481 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 NUDT1P36639 197 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 ZNF135P52742 658 aaPredicted RBP12.43□□□□□ -0.42
MSH5-216ENST00000484309 RPS21P63220 83 aaKnown RBP12.43□□□□□ -0.42
MSH5-216ENST00000484309 SEMG2Q02383 582 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 IL10RBQ08334 325 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 MESDQ14696 234 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 SHBQ15464 509 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 HADHQ16836 314 aaKnown RBP12.43□□□□□ -0.42
MSH5-216ENST00000484309 KIAA1161Q6NSJ0 714 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 NEK5Q6P3R8 708 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 SARM1Q6SZW1 724 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 GCNT7Q6ZNI0 430 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 SRLQ86TD4 932 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 TTC7BQ86TV6 843 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 CNGA4Q8IV77 575 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 PNPLA1Q8N8W4 532 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms