RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 ACOT2P49753 483 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 CDH4P55283 916 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 GCNT7Q6ZNI0 430 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 LPCAT1Q8NF37 534 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 LRTOMTQ8WZ04 291 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 SENP6Q9GZR1 1112 aaPredicted RBP10.34□□□□□ -0.75
COL12A1-207ENST00000483888 IGSF9Q9P2J2 1179 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 TBX10O75333 385 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 RPLP0P05388 317 aaKnown RBP10.34□□□□□ -0.75
COL12A1-207ENST00000483888 ABHD2P08910 425 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 SNX20Q7Z614 316 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 COMMD2Q86X83 199 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 ALLCQ8N6M5 410 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 C3orf58Q8NDZ4 430 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 AAR2Q9Y312 384 aaKnown RBP10.34□□□□□ -0.75
COL12A1-207ENST00000483888 SHANK2Q9UPX8 1470 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 RPS8P62241 208 aaKnown RBP10.34□□□□□ -0.75
COL12A1-207ENST00000483888 MXD1Q05195 221 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 RHEBQ15382 184 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 SRFBP1Q8NEF9 429 aaKnown RBP10.34□□□□□ -0.75
COL12A1-207ENST00000483888 AVILO75366 819 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 RORCP51449 518 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 EMC2Q15006 297 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 DCAF6Q58WW2 860 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 XKR5Q6UX68 686 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 CMTR2Q8IYT2 770 aaKnown RBP10.34□□□□□ -0.75
COL12A1-207ENST00000483888 HDDC3Q8N4P3 179 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 SLC37A3Q8NCC5 494 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 KLHL5Q96PQ7 755 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 DNAJC18Q9H819 358 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 CYTH4Q9UIA0 394 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 U3KQV3 271 aa10.34□□□□□ -0.75
COL12A1-207ENST00000483888 PLA2G6O60733 806 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 PEX11AO75192 247 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 VPS26AO75436 327 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 OR5F1O95221 314 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 VDRP11473 427 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 CDKL4Q5MAI5 379 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 SLC38A2Q96QD8 506 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 TRPC4Q9UBN4 977 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 TJP2Q9UDY2 1190 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 DNPEPQ9ULA0 475 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 MAFFQ9ULX9 164 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 ZNF609O15014 1411 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 ZNF99A8MXY4 864 aaPredicted RBP10.33□□□□□ -0.76
COL12A1-207ENST00000483888 COQ9O75208 318 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 SLC15A1P46059 708 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 GRIA4P48058 902 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 NKX2-5P52952 324 aaPredicted RBP10.33□□□□□ -0.76
COL12A1-207ENST00000483888 TGFBIQ15582 683 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 HIST2H2ACQ16777 129 aaPredicted RBP10.33□□□□□ -0.76
COL12A1-207ENST00000483888 FAM187BQ17R55 369 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 WDR72Q3MJ13 1102 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 HIST2H2AA3Q6FI13 130 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 PIGKQ92643 395 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 GZMAP12544 262 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 SLC7A2P52569 658 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 OGFRL1Q5TC84 451 aaPredicted RBP10.33□□□□□ -0.76
COL12A1-207ENST00000483888 CFAP206Q8IYR0 622 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 STOML3Q8TAV4 291 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 FAM49AQ9H0Q0 323 aaPredicted RBP10.33□□□□□ -0.76
COL12A1-207ENST00000483888 PTBP2Q9UKA9 531 aaKnown RBP10.33□□□□□ -0.76
COL12A1-207ENST00000483888 PPIEQ9UNP9 301 aaKnown RBP10.33□□□□□ -0.76
COL12A1-207ENST00000483888 MLH3Q9UHC1 1453 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 SAMD9Q5K651 1589 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 EPHA3P29320 983 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 GRK4P32298 578 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 TIGD2Q4W5G0 525 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 PDSS2Q86YH6 399 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 SLC20A1Q8WUM9 679 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 METTL8Q9H825 291 aaKnown RBP10.33□□□□□ -0.76
COL12A1-207ENST00000483888 LIN28AQ9H9Z2 209 aaKnown RBP10.33□□□□□ -0.76
COL12A1-207ENST00000483888 SACM1LQ9NTJ5 587 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 RPS3P23396 243 aaKnown RBP eCLIP10.33□□□□□ -0.76
COL12A1-207ENST00000483888 RPS9P46781 194 aaKnown RBP10.33□□□□□ -0.76
COL12A1-207ENST00000483888 CYP24A1Q07973 514 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 EML3Q32P44 896 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 SPPL2CQ8IUH8 684 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 SPERTQ8NA61 448 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 INPP4AQ96PE3 977 aaPredicted RBP10.33□□□□□ -0.76
COL12A1-207ENST00000483888 DNMBPQ6XZF7 1577 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 GJB6O95452 261 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 CD4P01730 458 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 PGAM1P18669 254 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 IGFBP5P24593 272 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 MAGEA6P43360 314 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 PDK2Q15119 407 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 MEA1Q16626 185 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 PIK3R6Q5UE93 754 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 CNPPD1Q9BV87 410 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 MIEF1Q9NQG6 463 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 XPNPEP3Q9NQH7 507 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 TAS2R3Q9NYW6 316 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 MGAT4AQ9UM21 535 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 PRAMEF1O95521 474 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 AADACL2Q6P093 401 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 ABI1Q8IZP0 508 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 ACTL9Q8TC94 416 aa10.33□□□□□ -0.76
COL12A1-207ENST00000483888 PHF10Q8WUB8 498 aaKnown RBP10.33□□□□□ -0.76
COL12A1-207ENST00000483888 BAP1Q92560 729 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms