RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 ARHGEF15O94989 841 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 CXCL14O95715 111 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 OLFM2O95897 454 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 CD160O95971 181 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 AHSGP02765 367 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 ATXN1LP0C7T5 689 aaKnown RBP8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 HDCP19113 662 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 BGNP21810 368 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 GABRR2P28476 465 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 CRHR1P34998 444 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 CDH4P55283 916 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 CORO7P57737 925 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 PDE1BQ01064 536 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 OVGP1Q12889 678 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 FRG1Q14331 258 aaKnown RBP8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 ITIH4Q14624 930 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 ACBD5Q5T8D3 534 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 RNF187Q5TA31 235 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 TMC7Q7Z402 723 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 YTHDF3Q7Z739 585 aaKnown RBP8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 RNF135Q8IUD6 432 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 MFSD6LQ8IWD5 586 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 PLD6Q8N2A8 252 aaKnown RBP8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 MAB21L3Q8N8X9 362 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 SLC22A17Q8WUG5 538 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 C20orf27Q9GZN8 174 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 MANSC1Q9H8J5 431 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 ARNT2Q9HBZ2 717 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 TCAF1Q9Y4C2 921 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 CPQQ9Y646 472 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 MYLKQ15746 1914 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 MUC3AQ02505 3323 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 AURKAO14965 403 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 ALADP13716 330 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 CNTFP26441 200 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 CCR2P41597 374 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 LIMK2P53671 638 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 MPP1Q00013 466 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 SIRPB2Q5JXA9 342 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 GRTP1Q5TC63 336 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 ZNF449Q6P9G9 518 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 POTEHQ6S545 545 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 LINGO4Q6UY18 593 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 TMC8Q8IU68 726 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 HERC6Q8IVU3 1022 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 ZNF513Q8N8E2 541 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 OR13J1Q8NGT2 312 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 WFDC5Q8TCV5 224 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 SMIM14Q96QK8 99 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 TCF25Q9BQ70 676 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 NSRP1Q9H0G5 558 aaKnown RBP8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 SMG9Q9H0W8 520 aaKnown RBP8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 MAGEH1Q9H213 219 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 VPS45Q9NRW7 570 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 HCFC1R1Q9NWW0 138 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 MKS1Q9NXB0 559 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 TXNDC16Q9P2K2 825 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 STOML2Q9UJZ1 356 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 TBC1D30Q9Y2I9 924 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 KCTD3Q9Y597 815 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 NUMBLQ9Y6R0 609 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 LOC285095A0A1B0GVY8 99 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 A0A1W2PRU2 124 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 CCT8L1PA6NM43 557 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 CBX4O00257 560 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 SNAP91O60641 907 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 CLDN11O75508 207 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 C1RP00736 705 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 C8AP07357 584 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 PIRTP0C851 137 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 BMP1P13497 986 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 MZF1P28698 734 aaPredicted RBP8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 TYK2P29597 1187 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 ARF5P84085 180 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 SEPT6Q14141 434 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 PTPRCAPQ14761 206 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 ATG14Q6ZNE5 492 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 ZC3HC1Q86WB0 502 aaKnown RBP8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 SPATS2Q86XZ4 545 aaKnown RBP8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 FITM2Q8N6M3 262 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 ANKS4BQ8N8V4 417 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 HERVK_113Q902F9 699 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 VPS39Q96JC1 886 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 RAD9AQ99638 391 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 POLR1EQ9GZS1 481 aaKnown RBP8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 IQCGQ9H095 443 aaKnown RBP8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 NOD2Q9HC29 1040 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 SNX15Q9NRS6 342 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 TMEM216Q9P0N5 145 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 CLEC4EQ9ULY5 219 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 STARD13Q9Y3M8 1113 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 PLXNA4Q9HCM2 1894 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 CCDC195A0A1B0GUA6 201 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 A0A1B0GVM2 712 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 TCAF2A6NFQ2 919 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 AP3B1O00203 1094 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 GFRA2O00451 464 aa8.93□□□□□ -0.98
CDC42SE1-204ENST00000483763 BUD23O43709 281 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms