RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 NPHS2Q9NP85 383 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 PTPRSQ13332 1948 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 A0A096LPK6 155 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 TGM5O43548 720 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 DNAJC8O75937 253 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-225ENST00000483495 RHOCP08134 193 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 IRF1P10914 325 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 HLA-DPA1P20036 260 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 DNAJB1P25685 340 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 TMPRSS15P98073 1019 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 GRM3Q14832 879 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 CHI3L2Q15782 390 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 CCDC153Q494R4 210 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 FASTKD1Q53R41 847 aaKnown RBP13.38□□□□□ -0.27
CPNE1-225ENST00000483495 IL31Q6EBC2 164 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 CXorf57Q6NSI4 855 aaKnown RBP13.38□□□□□ -0.27
CPNE1-225ENST00000483495 C16orf46Q6P387 395 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 Q6ZNB5 142 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 KIAA0408Q6ZU52 694 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 LCA5Q86VQ0 697 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 FAM217AQ8IXS0 508 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 FIBCD1Q8N539 461 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 PEX13Q92968 403 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 THOC1Q96FV9 657 aaKnown RBP13.38□□□□□ -0.27
CPNE1-225ENST00000483495 ATXN7L3BQ96GX2 97 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 SLC22A12Q96S37 553 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 LRRC3Q9BY71 257 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 TMEM216Q9P0N5 145 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 UBA2Q9UBT2 640 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-225ENST00000483495 GGT7Q9UJ14 662 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 CHKBQ9Y259 395 aa13.38□□□□□ -0.27
CPNE1-225ENST00000483495 KIAA1671Q9BY89 1806 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 ANAPC1Q9H1A4 1944 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 TTC24A2A3L6 582 aaPredicted RBP13.37□□□□□ -0.27
CPNE1-225ENST00000483495 DCTN3O75935 186 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 FGF1P05230 155 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 C2P06681 752 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 F7P08709 466 aaPredicted RBP13.37□□□□□ -0.27
CPNE1-225ENST00000483495 DLDP09622 509 aaKnown RBP13.37□□□□□ -0.27
CPNE1-225ENST00000483495 SMAD3P84022 425 aaKnown RBP13.37□□□□□ -0.27
CPNE1-225ENST00000483495 CDK18Q07002 472 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 OVGP1Q12889 678 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 SEPT6Q14141 434 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 SPDYAQ5MJ70 313 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 MBLAC2Q68D91 279 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 GALNT7Q86SF2 657 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 DENND6AQ8IWF6 608 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 ACVR1CQ8NER5 493 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 OR13J1Q8NGT2 312 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 TRIB3Q96RU7 358 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 CYP2S1Q96SQ9 504 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 CAB39LQ9H9S4 337 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 KCNK13Q9HB14 408 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 ANKRD6Q9Y2G4 727 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 CAPN7Q9Y6W3 813 aa13.37□□□□□ -0.27
CPNE1-225ENST00000483495 GJB3O75712 270 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 SERPINF2P08697 491 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 FGF3P11487 239 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-225ENST00000483495 CR2P20023 1033 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 CES1P23141 567 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 SLC1A2P43004 574 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 ABCG1P45844 678 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 ZXDBP98169 803 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 ACVR1Q04771 509 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 PPIGQ13427 754 aaKnown RBP eCLIP13.36□□□□□ -0.276e-12■■□□□ 14.1
CPNE1-225ENST00000483495 LAMB3Q13751 1172 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 THOC5Q13769 683 aaKnown RBP13.36□□□□□ -0.27
CPNE1-225ENST00000483495 PCLAFQ15004 111 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 SETDB1Q15047 1291 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 TXNDC8Q6A555 127 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 NEPROQ6NW34 567 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 TMC8Q8IU68 726 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 PLD6Q8N2A8 252 aaKnown RBP13.36□□□□□ -0.27
CPNE1-225ENST00000483495 ARL14EPQ8N8R7 260 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-225ENST00000483495 KLHL23Q8NBE8 558 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 RFWD2Q8NHY2 731 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 CALML6Q8TD86 181 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 LRRC37BQ96QE4 947 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 SPON2Q9BUD6 331 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 TRPC7Q9HCX4 862 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 THAP1Q9NVV9 213 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 SMPD4Q9NXE4 827 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 COPG2Q9UBF2 871 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 FBXO5Q9UKT4 447 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 RIMKLBQ9ULI2 386 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 INSL6Q9Y581 213 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 PLXNA4Q9HCM2 1894 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 MYLKQ15746 1914 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 ZBBXA8MT70 800 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 SLC7A4O43246 635 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 LDB2O43679 373 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 TSPAN3O60637 253 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 FGBP02675 491 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 SPATA31D3P0C874 917 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 HDCP19113 662 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 GLDCP23378 1020 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 SKIV2L2P42285 1042 aaKnown RBP13.36□□□□□ -0.27
CPNE1-225ENST00000483495 MPP1Q00013 466 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 STX3Q13277 289 aa13.36□□□□□ -0.27
CPNE1-225ENST00000483495 CTBP1Q13363 440 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms