RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 KNL1Q8NG31 2342 aa13.58□□□□□ -0.24
SSR1-208ENST00000483409 ASCC3Q8N3C0 2202 aaKnown RBP13.58□□□□□ -0.24
SSR1-208ENST00000483409 A0A1B0GTW7 788 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 GOLGA6L3A6NEY3 463 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 C16orf96A6NNT2 1141 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 BTNL10A8MVZ5 291 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 MUSKO15146 869 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 GJB3O75712 270 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 PEX11BO96011 259 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 ADRB3P13945 408 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 CD27P26842 260 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 GARSP41250 739 aaKnown RBP13.57□□□□□ -0.24
SSR1-208ENST00000483409 MAPK8P45983 427 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 CCR5P51681 352 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 SLC10A7Q0GE19 358 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 CCDC15Q0P6D6 951 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 GALNT2Q10471 571 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 ZNF235Q14590 738 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 LLGL1Q15334 1064 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 LRRC73Q5JTD7 316 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 FBXL19Q6PCT2 694 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 LAYNQ6UX15 382 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 MFSD7Q6UXD7 560 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 GDPD4Q6W3E5 623 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 RFX6Q8HWS3 928 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 C1orf216Q8TAB5 229 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 NETO1Q8TDF5 533 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.57□□□□□ -0.24
SSR1-208ENST00000483409 LRRN4Q8WUT4 740 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 RMDN1Q96DB5 314 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 SLC6A18Q96N87 628 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 ZNF599Q96NL3 588 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 ORAI3Q9BRQ5 295 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 GTPBP2Q9BX10 602 aaKnown RBP13.57□□□□□ -0.24
SSR1-208ENST00000483409 MAK16Q9BXY0 300 aaKnown RBP13.57□□□□□ -0.24
SSR1-208ENST00000483409 KDM4CQ9H3R0 1056 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 CAPN10Q9HC96 672 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 PREBQ9HCU5 417 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 TM9SF3Q9HD45 589 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 SEPT3Q9UH03 358 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 SPTBN4Q9H254 2564 aa13.57□□□□□ -0.24
SSR1-208ENST00000483409 DCHS1Q96JQ0 3298 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 A0A1W2PPC4 97 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 MACROD2A1Z1Q3 448 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 TTC24A2A3L6 582 aaPredicted RBP13.56□□□□□ -0.24
SSR1-208ENST00000483409 ZNF487B1APH4 448 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 C10orf142B7Z368 130 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 APOL1O14791 398 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 RNGTTO60942 597 aaKnown RBP13.56□□□□□ -0.24
SSR1-208ENST00000483409 PCDH8O95206 1070 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 ENGP17813 658 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 ABL2P42684 1182 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 DYNLT1P63172 113 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 SLC10A2Q12908 348 aaPredicted RBP13.56□□□□□ -0.24
SSR1-208ENST00000483409 STPG1Q5TH74 334 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 SRLQ86TD4 932 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 VSIG1Q86XK7 387 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 PLD5Q8N7P1 536 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 NSMCE1Q8WV22 266 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 KRT35Q92764 455 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 KLK6Q92876 244 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 PSKH2Q96QS6 385 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 TMEM9BQ9NQ34 198 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 DTLQ9NZJ0 730 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 ITM2BQ9Y287 266 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 HEY1Q9Y5J3 304 aa13.56□□□□□ -0.24
SSR1-208ENST00000483409 A0A1W2PQU0 124 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 GRID2IPA4D2P6 1211 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 LATO43561 262 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 KRT10P13645 584 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 MMP13P45452 471 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 CSNK1EP49674 416 aaKnown RBP13.55□□□□□ -0.24
SSR1-208ENST00000483409 SCNN1BP51168 640 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 RENBPP51606 427 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 AFF3P51826 1226 aaKnown RBP13.55□□□□□ -0.24
SSR1-208ENST00000483409 ATXN3P54252 364 aaPredicted RBP13.55□□□□□ -0.24
SSR1-208ENST00000483409 MAXP61244 160 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 KIF5AQ12840 1032 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 GRIK2Q13002 908 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 KAZNQ674X7 775 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 SLC9A4Q6AI14 798 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 NPNTQ6UXI9 565 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 SPOCD1Q6ZMY3 1216 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 PRPF39Q86UA1 669 aaKnown RBP13.55□□□□□ -0.24
SSR1-208ENST00000483409 TRIM69Q86WT6 500 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 CAMK1DQ8IU85 385 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 CCDC50Q8IVM0 306 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 KATNAL2Q8IYT4 538 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 BBS5Q8N3I7 341 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 TXLNBQ8N3L3 684 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 PGBD5Q8N414 524 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 OR2I1PQ8NGU4 316 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 SERAC1Q96JX3 654 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 CALR3Q96L12 384 aaKnown RBP13.55□□□□□ -0.24
SSR1-208ENST00000483409 ZNF830Q96NB3 372 aaPredicted RBP13.55□□□□□ -0.24
SSR1-208ENST00000483409 CPEB1Q9BZB8 566 aaKnown RBP13.55□□□□□ -0.24
SSR1-208ENST00000483409 ATP13A3Q9H7F0 1226 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 GGT7Q9UJ14 662 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 FADS3Q9Y5Q0 445 aa13.55□□□□□ -0.24
SSR1-208ENST00000483409 A0A1B0GVT2 93 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms