RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 LRP12Q9Y561 859 aa4.03□□□□□ -1.76
GTF3A-207ENST00000482655 PXDNQ92626 1479 aa4.03□□□□□ -1.76
GTF3A-207ENST00000482655 PTCH1Q13635 1447 aa4.03□□□□□ -1.76
GTF3A-207ENST00000482655 ERBINQ96RT1 1412 aa4.03□□□□□ -1.76
GTF3A-207ENST00000482655 CYP3A7-CYP3A51PA0A087WV96 503 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 SAC3D1A6NKF1 404 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 A6NLC8 198 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 MCIDASD6RGH6 385 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 EYA2O00167 538 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 HNRNPRO43390 633 aaKnown RBP4.02□□□□□ -1.77
GTF3A-207ENST00000482655 KLKB1P03952 638 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 IFIT1P09914 478 aaKnown RBP4.02□□□□□ -1.77
GTF3A-207ENST00000482655 TNFAIP3P21580 790 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 CYP3A7P24462 503 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 ARRB2P32121 409 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 MAN1A1P33908 653 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 ENTPD1P49961 510 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 FOXL2P58012 376 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 FAM3BP58499 235 aaPredicted RBP4.02□□□□□ -1.77
GTF3A-207ENST00000482655 ZXDBP98169 803 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 CHRNDQ07001 517 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 GALNTL6Q49A17 601 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 ZNF585BQ52M93 769 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 ARL13AQ5H913 290 aaPredicted RBP4.02□□□□□ -1.77
GTF3A-207ENST00000482655 MAP3K21Q5TCX8 1036 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 KDELC2Q7Z4H8 507 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 MDGA2Q7Z553 956 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.02□□□□□ -1.77
GTF3A-207ENST00000482655 IGFN1Q86VF2 1251 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 ANKRD44Q8N8A2 993 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 C7orf57Q8NEG2 295 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 HDAC2Q92769 488 aaKnown RBP4.02□□□□□ -1.77
GTF3A-207ENST00000482655 LRRC59Q96AG4 307 aaKnown RBP4.02□□□□□ -1.77
GTF3A-207ENST00000482655 PIGSQ96S52 555 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 ARHGAP39Q9C0H5 1083 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 TXNRD2Q9NNW7 524 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 SIRT3Q9NTG7 399 aaPredicted RBP4.02□□□□□ -1.77
GTF3A-207ENST00000482655 SMC4Q9NTJ3 1288 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 GGA3Q9NZ52 723 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 TBC1D14Q9P2M4 693 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 COPG1Q9Y678 874 aaKnown RBP4.02□□□□□ -1.77
GTF3A-207ENST00000482655 E9PCH4 1651 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 ADGRL3Q9HAR2 1447 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 PIK3R4Q99570 1358 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 KIF15Q9NS87 1388 aa4.02□□□□□ -1.77
GTF3A-207ENST00000482655 ITIH6Q6UXX5 1313 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 MBD3L5A6NJ08 208 aaPredicted RBP4.01□□□□□ -1.77
GTF3A-207ENST00000482655 SLC38A8A6NNN8 435 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 NEURL1O76050 574 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 CNPP09543 421 aaKnown RBP4.01□□□□□ -1.77
GTF3A-207ENST00000482655 TNNT1P13805 278 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 MLH1P40692 756 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 RFX2P48378 723 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 PDCLQ13371 301 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 Q5PR19 223 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 WASHC2DQ5SRD0 308 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 HYIQ5T013 277 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 ASPHD1Q5U4P2 390 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 ATG16L1Q676U5 607 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 SYNE3Q6ZMZ3 975 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 PCGF5Q86SE9 256 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 CCDC25Q86WR0 208 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 HEATR4Q86WZ0 1026 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 CPOQ8IVL8 374 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 TCP11L2Q8N4U5 519 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 SLC25A41Q8N5S1 370 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 TSPYL6Q8N831 410 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 PCYOX1LQ8NBM8 494 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 SMRP1Q8NCR6 262 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 OIT3Q8WWZ8 545 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 IP6K1Q92551 441 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 HTRA1Q92743 480 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 INPP5DQ92835 1189 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 MIB2Q96AX9 1013 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 HVCN1Q96D96 273 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 TWNKQ96RR1 684 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 MEIS3Q99687 375 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 GPR63Q9BZJ6 419 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 ISCUQ9H1K1 167 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 MAP6D1Q9H9H5 199 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 KRCC1Q9NPI7 259 aaPredicted RBP4.01□□□□□ -1.77
GTF3A-207ENST00000482655 RRP7BPQ9NSQ0 103 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 RNF146Q9NTX7 359 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 PLK2Q9NYY3 685 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 NCKIPSDQ9NZQ3 722 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 SELENONQ9NZV5 590 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 SWAP70Q9UH65 585 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 FBXO9Q9UK97 447 aaPredicted RBP4.01□□□□□ -1.77
GTF3A-207ENST00000482655 FBXO4Q9UKT5 387 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 MYO6Q9UM54 1294 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 PCDHA7Q9UN72 937 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 ARHGAP26Q9UNA1 814 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 INSL5Q9Y5Q6 135 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 NRAPQ86VF7 1730 aa4.01□□□□□ -1.77
GTF3A-207ENST00000482655 RREB1Q92766 1687 aa4□□□□□ -1.77
GTF3A-207ENST00000482655 KCNJ18B7U540 433 aa4□□□□□ -1.77
GTF3A-207ENST00000482655 PRR23D1E9PI22 279 aaPredicted RBP4□□□□□ -1.77
GTF3A-207ENST00000482655 STX16-NPEPL1H3BU86 382 aa4□□□□□ -1.77
GTF3A-207ENST00000482655 GTPBP1O00178 669 aaKnown RBP4□□□□□ -1.77
GTF3A-207ENST00000482655 STX16O14662 325 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms