RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 SDCBP2Q9H190 292 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 ADAM7Q9H2U9 754 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 R3HDMLQ9H3Y0 253 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 SAYSD1Q9NPB0 183 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 SLC38A7Q9NVC3 462 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 PAK5Q9P286 719 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 RCOR3Q9P2K3 495 aaPredicted RBP7.92□□□□□ -1.14
SNX13-208ENST00000482558 PPARGC1AQ9UBK2 798 aaKnown RBP7.92□□□□□ -1.14
SNX13-208ENST00000482558 TRAF6Q9Y4K3 522 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 BCLAF3A2AJT9 711 aaKnown RBP7.91□□□□□ -1.14
SNX13-208ENST00000482558 E7ESA3 106 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 PI4K2BG5E9Z4 385 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 H3BML4 177 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 M0QZ92 97 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 HAS3O00219 553 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 PIRO00625 290 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 CHADO15335 359 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 PRPF4O43172 522 aaKnown RBP eCLIP7.91□□□□□ -1.14
SNX13-208ENST00000482558 HUS1O60921 280 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 TIPRLO75663 272 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 GSTA1P08263 222 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 C1QTNF9P0C862 333 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 DHRS4L1P0CG22 281 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 DRD4P21917 467 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 TNFSF4P23510 183 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 TAF6P49848 677 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 ZNF135P52742 658 aaPredicted RBP7.91□□□□□ -1.14
SNX13-208ENST00000482558 SEC24CP53992 1094 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 AIF1P55008 147 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 EIF3EP60228 445 aaKnown RBP7.91□□□□□ -1.14
SNX13-208ENST00000482558 IFI35P80217 286 aaPredicted RBP7.91□□□□□ -1.14
SNX13-208ENST00000482558 RNASELQ05823 741 aaKnown RBP7.91□□□□□ -1.14
SNX13-208ENST00000482558 NOMO1Q15155 1222 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 TRIP13Q15645 432 aaPredicted RBP7.91□□□□□ -1.14
SNX13-208ENST00000482558 GPR162Q16538 588 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 GOLGA7BQ2TAP0 167 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 ANO4Q32M45 955 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 LACTB2Q53H82 288 aaPredicted RBP7.91□□□□□ -1.14
SNX13-208ENST00000482558 LGSNQ5TDP6 509 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 RNF220Q5VTB9 566 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 C9orf57Q5W0N0 161 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 SLC26A9Q7LBE3 791 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 STRADAQ7RTN6 431 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 LIMS2Q7Z4I7 341 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 PIGWQ7Z7B1 504 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 TLK2Q86UE8 772 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 CDKL3Q8IVW4 592 aaPredicted RBP7.91□□□□□ -1.14
SNX13-208ENST00000482558 CCDC13Q8IYE1 715 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 APPL2Q8NEU8 664 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 JOSD2Q8TAC2 188 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 PYROXD1Q8WU10 500 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 SLC35F5Q8WV83 523 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 RXFP2Q8WXD0 754 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 PRCCQ92733 491 aaPredicted RBP7.91□□□□□ -1.14
SNX13-208ENST00000482558 KIAA1191Q96A73 305 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 MAGEB18Q96M61 343 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 RNF157Q96PX1 679 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 SNX25Q9H3E2 840 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 ZWILCHQ9H900 591 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 SETD4Q9NVD3 440 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 PSMC3IPQ9P2W1 217 aaPredicted RBP7.91□□□□□ -1.14
SNX13-208ENST00000482558 CYTH4Q9UIA0 394 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 NAALADL1Q9UQQ1 740 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 EMC9Q9Y3B6 208 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 PCDHB12Q9Y5F1 795 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 SNX9Q9Y5X1 595 aa7.91□□□□□ -1.14
SNX13-208ENST00000482558 CLUHO75153 1309 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.9□□□□□ -1.14
SNX13-208ENST00000482558 TMEM120BA0PK00 339 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 ARHGEF37A1IGU5 675 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 C17orf102A2RUQ5 167 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 FAM47DPA6NHR8 397 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 SMIM23A6NLE4 172 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 A8MXQ7 604 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 KPNA7A9QM74 516 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 HACD1B0YJ81 288 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 E5RJQ4 531 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 EIF3FO00303 357 aaPredicted RBP7.9□□□□□ -1.14
SNX13-208ENST00000482558 TRDMT1O14717 391 aaKnown RBP7.9□□□□□ -1.14
SNX13-208ENST00000482558 APOL1O14791 398 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 H2AFYO75367 372 aaKnown RBP7.9□□□□□ -1.14
SNX13-208ENST00000482558 SUN1O94901 812 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 ZWINTO95229 277 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 IFNB1P01574 187 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 POU2F2P09086 479 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 BRAFP15056 766 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 PECAM1P16284 738 aaPredicted RBP7.9□□□□□ -1.14
SNX13-208ENST00000482558 WARSP23381 471 aaKnown RBP7.9□□□□□ -1.14
SNX13-208ENST00000482558 IL1R2P27930 398 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 LRPAP1P30533 357 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 HOXC13P31276 330 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 STX2P32856 288 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 GALNSP34059 522 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 GNL1P36915 607 aaPredicted RBP7.9□□□□□ -1.14
SNX13-208ENST00000482558 MAGEA6P43360 314 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 KIR3DL1P43629 444 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 CTCFP49711 727 aaPredicted RBP7.9□□□□□ -1.14
SNX13-208ENST00000482558 VPS41P49754 854 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 CDH6P55285 790 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 GFRA1P56159 465 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms