RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 ZNF212Q9UDV6 495 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 APPL1Q9UKG1 709 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 PRRG1O14668 218 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 PEX1O43933 1283 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 SERPINF2P08697 491 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 RAB27AP51159 221 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 PCLAFQ15004 111 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 PPM1LQ5SGD2 360 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 CNSTQ6PJW8 725 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 AGMOQ6ZNB7 445 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 DCBLD1Q8N8Z6 715 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 C3orf58Q8NDZ4 430 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 PDZD8Q8NEN9 1154 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 PSMG2Q969U7 264 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.24□□□□□ -0.931e-7■■■■■ 35.3
CALD1-220ENST00000482470 SKA1Q96BD8 255 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 TBATAQ96M53 351 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 GPR63Q9BZJ6 419 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 KLHL4Q9C0H6 718 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 C20orf27Q9GZN8 174 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 FBXO44Q9H4M3 255 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 MID1IP1Q9NPA3 183 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 MOCS1Q9NZB8 636 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 SIRPGQ9P1W8 387 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 RNF112Q9ULX5 631 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 SIPA1L1O43166 1804 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 NRXN2Q9P2S2 1712 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 KPNA6O60684 536 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 AHSGP02765 367 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 GM2AP17900 193 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 CRABP2P29373 138 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 PPIDQ08752 370 aaKnown RBP9.24□□□□□ -0.93
CALD1-220ENST00000482470 CRHR2Q13324 411 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 ITGA7Q13683 1181 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 FASTKQ14296 549 aaKnown RBP9.24□□□□□ -0.93
CALD1-220ENST00000482470 UBXN11Q5T124 520 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 RGMBQ6NW40 437 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 MAMDC4Q6UXC1 1216 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 NET1Q7Z628 596 aaPredicted RBP9.24□□□□□ -0.93
CALD1-220ENST00000482470 PCSK9Q8NBP7 692 aaKnown RBP9.24□□□□□ -0.93
CALD1-220ENST00000482470 ACBD6Q9BR61 282 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 WDR41Q9HAD4 459 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 CYLDQ9NQC7 956 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 TLR8Q9NR97 1041 aaKnown RBP9.24□□□□□ -0.93
CALD1-220ENST00000482470 LATS2Q9NRM7 1088 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 ADAM28Q9UKQ2 775 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 RAP2CQ9Y3L5 183 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 SLC30A1Q9Y6M5 507 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 NUP205Q92621 2012 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.24□□□□□ -0.93
CALD1-220ENST00000482470 TTC36A6NLP5 189 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 TBKBP1A7MCY6 615 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 RBP1P09455 135 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 SP100P23497 879 aaPredicted RBP9.24□□□□□ -0.93
CALD1-220ENST00000482470 EEF1B2P24534 225 aaKnown RBP9.24□□□□□ -0.93
CALD1-220ENST00000482470 HADHAP40939 763 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 ALDH7A1P49419 539 aaKnown RBP9.24□□□□□ -0.93
CALD1-220ENST00000482470 ZNF177Q13360 481 aaPredicted RBP9.24□□□□□ -0.93
CALD1-220ENST00000482470 NRF1Q16656 503 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 LSM12Q3MHD2 195 aaKnown RBP9.24□□□□□ -0.93
CALD1-220ENST00000482470 PKDCCQ504Y2 493 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 CYP4V2Q6ZWL3 525 aaPredicted RBP9.24□□□□□ -0.93
CALD1-220ENST00000482470 SPNS2Q8IVW8 549 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 BHLHE22Q8NFJ8 381 aaPredicted RBP9.24□□□□□ -0.93
CALD1-220ENST00000482470 RSPH1Q8WYR4 309 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 SLC9A7Q96T83 725 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 ZYG11BQ9C0D3 744 aa9.24□□□□□ -0.93
CALD1-220ENST00000482470 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.24□□□□□ -0.93
CALD1-220ENST00000482470 MCM3APO60318 1980 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 KIAA1217Q5T5P2 1943 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 DPPA5A6NC42 116 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 H0Y626 953 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 PQBP1O60828 265 aaKnown RBP9.23□□□□□ -0.93
CALD1-220ENST00000482470 ZNF189O75820 626 aaPredicted RBP9.23□□□□□ -0.93
CALD1-220ENST00000482470 CABYRO75952 493 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 BAIAP3O94812 1187 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 HLA-DQB2P05538 268 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 FGF3P11487 239 aaPredicted RBP9.23□□□□□ -0.93
CALD1-220ENST00000482470 OXCT1P55809 520 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 SREBF2Q12772 1141 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 GRIK3Q13003 919 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 STX5Q13190 355 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 MAP7Q14244 749 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 PTPRCAPQ14761 206 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 MAPRE2Q15555 327 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 ZBTB6Q15916 424 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 TAZQ16635 292 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 GPR158Q5T848 1215 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 MBLAC2Q68D91 279 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 CLEC6AQ6EIG7 209 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 GK5Q6ZS86 529 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 CARNMT1Q8N4J0 409 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 ASIC4Q96FT7 647 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 HMCESQ96FZ2 354 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 ATP13A1Q9HD20 1204 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 SEMA4BQ9NPR2 832 aaPredicted RBP9.23□□□□□ -0.93
CALD1-220ENST00000482470 STX18Q9P2W9 335 aaKnown RBP9.23□□□□□ -0.93
CALD1-220ENST00000482470 LNPEPQ9UIQ6 1025 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 PPM1HQ9ULR3 514 aa9.23□□□□□ -0.93
CALD1-220ENST00000482470 hCG_2014768A0A024R1R8 64 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms