RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 TMIEQ8NEW7 156 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 ZNF397Q8NF99 534 aaPredicted RBP9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 TPCN2Q8NHX9 752 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 JPH3Q8WXH2 748 aaPredicted RBP9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 FAM81BQ96LP2 452 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 CCDC114Q96M63 670 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 NPY6RQ99463 290 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 CCDC3Q9BQI4 270 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 HDAC8Q9BY41 377 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 TKTL2Q9H0I9 626 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 TNKS2Q9H2K2 1166 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 ZNF768Q9H5H4 540 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 SYNCQ9H7C4 482 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 DYRK4Q9NR20 520 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 ARHGEF38Q9NXL2 777 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 FOXJ2Q9P0K8 574 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 SEPT10Q9P0V9 454 aa9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 AJAP1Q9UKB5 411 aaPredicted RBP9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 ZFR2Q9UPR6 939 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 FARP1Q9Y4F1 1045 aaPredicted RBP9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 NYNRINQ9P2P1 1898 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-210ENST00000481231 DOCK9Q9BZ29 2069 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 DRGXA6NNA5 263 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 ZNF821O75541 412 aaPredicted RBP9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 LEFTY1O75610 366 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 ENDOD1O94919 500 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 PCDH8O95206 1070 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 FGFR1OPO95684 399 aaKnown RBP9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 PNMA6AP0CW24 399 aaPredicted RBP9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 PON1P27169 355 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 RNASE9P60153 205 aaKnown RBP9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 HNRNPKP61978 463 aaKnown RBP eCLIP9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 CCDC15Q0P6D6 951 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 FGL2Q14314 439 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 EXOC3L4Q17RC7 722 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 ARSIQ5FYB1 569 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 BRMS1LQ5PSV4 323 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 DPY19L3Q6ZPD9 716 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 Q6ZSR6 202 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 SETD3Q86TU7 594 aaPredicted RBP9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 SLC47A2Q86VL8 602 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 SLC35F3Q8IY50 421 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 OR7D4Q8NG98 312 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 NT5C3BQ969T7 300 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 IFT43Q96FT9 208 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 WDCPQ9H6R7 721 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 PLCB1Q9NQ66 1216 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 GPR27Q9NS67 375 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 RRN3Q9NYV6 651 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 MPP6Q9NZW5 540 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 IL36AQ9UHA7 158 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 KLF15Q9UIH9 416 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 CELSR2Q9HCU4 2923 aa9.6□□□□□ -0.87
SMARCE1-210ENST00000481231 OTOGQ6ZRI0 2925 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 IGLV3-10A0A075B6K4 115 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 GTPBP10A4D1E9 387 aaKnown RBP9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 POM121BA6NF01 834 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 A6NNZ2 444 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 FOXN3O00409 490 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 NTN3O00634 580 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 RAD51BO15315 384 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 AQP9O43315 295 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 GADD45BO75293 160 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 ZMPSTE24O75844 475 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 KRT7P08729 469 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 JMJD7P0C870 316 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 NME1P15531 152 aaKnown RBP9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 ELAVL4P26378 380 aaKnown RBP9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 CLCN1P35523 988 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 KRT9P35527 623 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 DCTP40126 519 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 ETV5P41161 510 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 RECQLP46063 649 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 CD97P48960 835 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 SULT1E1P49888 294 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 MLLT10P55197 1068 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 SNX16P57768 344 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 PTK2Q05397 1052 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 DEUP1Q05D60 604 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 FZD2Q14332 565 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 LRRC31Q6UY01 552 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 KYAT3Q6YP21 454 aaKnown RBP9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 ATCAYQ86WG3 371 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 IRF2BP1Q8IU81 584 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 CREBRFQ8IUR6 639 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 SRRM1Q8IYB3 904 aaKnown RBP9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 FAM71AQ8IYT1 594 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 C9orf43Q8TAL5 461 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 LMX1AQ8TE12 382 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 PGAP3Q96FM1 320 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 PPP1R16AQ96I34 528 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 BMFQ96LC9 184 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 TBCBQ99426 244 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 SPON2Q9BUD6 331 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 SLC12A9Q9BXP2 914 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 SIX2Q9NPC8 291 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 NCKIPSDQ9NZQ3 722 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 ZNF212Q9UDV6 495 aa9.59□□□□□ -0.87
SMARCE1-210ENST00000481231 RWDD2AQ9UIY3 292 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms