RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 HNRNPKP61978 463 aaKnown RBP eCLIP15.47■□□□□ 0.07
LIMS3-203ENST00000480744 C1QBPQ07021 282 aaKnown RBP15.47■□□□□ 0.07
LIMS3-203ENST00000480744 PDE1CQ14123 709 aaPredicted RBP15.47■□□□□ 0.07
LIMS3-203ENST00000480744 FZD2Q14332 565 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 DCUN1D2Q6PH85 259 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 GDPD4Q6W3E5 623 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 ZSCAN30Q86W11 494 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 PARGQ86W56 976 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 RTL3Q8N8U3 475 aaKnown RBP15.47■□□□□ 0.07
LIMS3-203ENST00000480744 IFT43Q96FT9 208 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 CRELD1Q96HD1 420 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 APOLD1Q96LR9 279 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 EPAS1Q99814 870 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 C1QTNF2Q9BXJ5 285 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 OSBPL1AQ9BXW6 950 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 NRSN2Q9GZP1 204 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 KLC2Q9H0B6 622 aa15.47■□□□□ 0.07
LIMS3-203ENST00000480744 A0A087WV48 116 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 SPTY2D1-AS1A0A0U1RR47 76 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 GOLGA6L22H0YM25 854 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 SCAMP1O15126 338 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 IGSF6O95976 241 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 MT-CO3P00414 261 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 GIMD1P0DJR0 217 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 CKMT1AP12532 417 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 DESP17661 470 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 ZNF143P52747 638 aaPredicted RBP15.46■□□□□ 0.07
LIMS3-203ENST00000480744 RPL7AP62424 266 aaKnown RBP15.46■□□□□ 0.07
LIMS3-203ENST00000480744 RAD51Q06609 339 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 LRRC69Q6ZNQ3 347 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 TTC7BQ86TV6 843 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 VPS36Q86VN1 386 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 ZNF548Q8NEK5 533 aaPredicted RBP15.46■□□□□ 0.07
LIMS3-203ENST00000480744 RFFLQ8WZ73 363 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 ARHGEF26Q96DR7 871 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 HMCESQ96FZ2 354 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 ERGIC2Q96RQ1 377 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 KLF6Q99612 283 aaPredicted RBP15.46■□□□□ 0.07
LIMS3-203ENST00000480744 NOL6Q9H6R4 1146 aaKnown RBP15.46■□□□□ 0.07
LIMS3-203ENST00000480744 CATSPERBQ9H7T0 1116 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 GPR27Q9NS67 375 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 EVA1BQ9NVM1 165 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 FZD10Q9ULW2 581 aa15.46■□□□□ 0.07
LIMS3-203ENST00000480744 IGSF10Q6WRI0 2623 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 TCRBV5S1A1TA0A578 114 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 RASA4BC9J798 803 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 K7ESM1 405 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 SPINT1O43278 529 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 RASA4O43374 803 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 TLX3O43711 291 aaPredicted RBP15.45■□□□□ 0.06
LIMS3-203ENST00000480744 BRINP1O60477 761 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 MMP20O60882 483 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 CSF2P04141 144 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 NME1P15531 152 aaKnown RBP15.45■□□□□ 0.06
LIMS3-203ENST00000480744 FERP16591 822 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 JUNDP17535 347 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 XPAP23025 273 aaPredicted RBP15.45■□□□□ 0.06
LIMS3-203ENST00000480744 THOP1P52888 689 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 RTP5Q14D33 572 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 TPRG1LQ5T0D9 272 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 ACAD10Q6JQN1 1059 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 AOPEPQ8N6M6 819 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 DCBLD1Q8N8Z6 715 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 LMX1AQ8TE12 382 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 CXorf40AQ8TE69 158 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 CASKIN2Q8WXE0 1202 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 EXOC2Q96KP1 924 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 LENG8Q96PV6 779 aaPredicted RBP15.45■□□□□ 0.06
LIMS3-203ENST00000480744 NCAPGQ9BPX3 1015 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 CNPY3Q9BT09 278 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 WRAP53Q9BUR4 548 aaKnown RBP15.45■□□□□ 0.06
LIMS3-203ENST00000480744 DUSP23Q9BVJ7 150 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 TTYH3Q9C0H2 523 aa15.45■□□□□ 0.06
LIMS3-203ENST00000480744 ASXL3Q9C0F0 2248 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 BAHCC1Q9P281 2608 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 TMCO5BA8MYB1 307 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 RRP8O43159 456 aaKnown RBP15.44■□□□□ 0.06
LIMS3-203ENST00000480744 OPA1O60313 960 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 CCDC172P0C7W6 258 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 ATP1A3P13637 1013 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 ITIH2P19823 946 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 TNFAIP3P21580 790 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 ITPKBP27987 946 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 DUSP3P51452 185 aaPredicted RBP15.44■□□□□ 0.06
LIMS3-203ENST00000480744 YBEYP58557 167 aaPredicted RBP15.44■□□□□ 0.06
LIMS3-203ENST00000480744 TPI1P60174 286 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 NCAPHQ15003 741 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 DEFB133Q30KQ1 61 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 PARP15Q460N3 678 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 SOWAHCQ53LP3 525 aaPredicted RBP15.44■□□□□ 0.06
LIMS3-203ENST00000480744 MCOLN2Q8IZK6 566 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 DENND6BQ8NEG7 585 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 VOPP1Q96AW1 172 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 ABCG4Q9H172 646 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 GPATCH2LQ9NWQ4 482 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 TMEM63CQ9P1W3 806 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 KLF15Q9UIH9 416 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 PCDHB1Q9Y5F3 818 aa15.44■□□□□ 0.06
LIMS3-203ENST00000480744 LY6G6EA0A0G2JKS1 128 aa15.43■□□□□ 0.06
LIMS3-203ENST00000480744 CPED1A4D0V7 1026 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms