RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 MLNP12872 115 aa17.79■□□□□ 0.44
UPF3A-206ENST00000480362 ADRA1AP35348 466 aa17.79■□□□□ 0.44
UPF3A-206ENST00000480362 CSNK1DP48730 415 aa17.79■□□□□ 0.44
UPF3A-206ENST00000480362 ST8SIA6P61647 398 aa17.79■□□□□ 0.44
UPF3A-206ENST00000480362 SNRPD1P62314 119 aaKnown RBP17.79■□□□□ 0.44
UPF3A-206ENST00000480362 SLC14A2Q15849 920 aa17.79■□□□□ 0.44
UPF3A-206ENST00000480362 BBS9Q3SYG4 887 aa17.79■□□□□ 0.44
UPF3A-206ENST00000480362 RALGPS1Q5JS13 557 aa17.79■□□□□ 0.44
UPF3A-206ENST00000480362 HP1BP3Q5SSJ5 553 aaPredicted RBP17.79■□□□□ 0.44
UPF3A-206ENST00000480362 NUDT18Q6ZVK8 323 aa17.79■□□□□ 0.44
UPF3A-206ENST00000480362 LINC00523Q86TU6 105 aa17.79■□□□□ 0.44
UPF3A-206ENST00000480362 PCDH20Q8N6Y1 951 aaKnown RBP17.79■□□□□ 0.44
UPF3A-206ENST00000480362 OR2AP1Q8NGE2 309 aa17.79■□□□□ 0.44
UPF3A-206ENST00000480362 DNASE1L2Q92874 299 aa17.79■□□□□ 0.44
UPF3A-206ENST00000480362 P2RY13Q9BPV8 354 aa17.79■□□□□ 0.44
UPF3A-206ENST00000480362 FSD1LQ9BXM9 530 aa17.79■□□□□ 0.44
UPF3A-206ENST00000480362 TXLNGYQ9BZA5 131 aa17.79■□□□□ 0.44
UPF3A-206ENST00000480362 CASS4Q9NQ75 786 aa17.79■□□□□ 0.44
UPF3A-206ENST00000480362 PIH1D1Q9NWS0 290 aaKnown RBP17.79■□□□□ 0.44
UPF3A-206ENST00000480362 EVLQ9UI08 416 aaPredicted RBP17.79■□□□□ 0.44
UPF3A-206ENST00000480362 TTC34A8MYJ7 566 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 E7ESA3 106 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 SPECC1L-ADORA2AF8WAN1 911 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 NARSO43776 548 aaKnown RBP17.78■□□□□ 0.44
UPF3A-206ENST00000480362 BNIP3LO60238 219 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 IGSF6O95976 241 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 GSRP00390 522 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 MAGEA3P43357 314 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 MAGEA4P43358 317 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 PMS2P54278 862 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 AP1S1P61966 158 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 CBLBQ13191 982 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 CARD16Q5EG05 197 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 RANBP10Q6VN20 620 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 RYBPQ8N488 228 aaPredicted RBP17.78■□□□□ 0.44
UPF3A-206ENST00000480362 DNAAF3Q8N9W5 541 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 FRS2Q8WU20 508 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 UCMAQ8WVF2 138 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 MYO19Q96H55 970 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 PHACTR1Q9C0D0 580 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 C8orf33Q9H7E9 229 aaPredicted RBP17.78■□□□□ 0.44
UPF3A-206ENST00000480362 HEBP1Q9NRV9 189 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 SLC8A2Q9UPR5 921 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 PCDHGC4Q9Y5F7 938 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 SZT2Q5T011 3432 aa17.78■□□□□ 0.44
UPF3A-206ENST00000480362 LOC285095A0A1B0GVY8 99 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 ALOX15BO15296 676 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 CTHP32929 405 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 SESN2P58004 480 aaPredicted RBP17.77■□□□□ 0.44
UPF3A-206ENST00000480362 CDK18Q07002 472 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 CDH17Q12864 832 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 TDGQ13569 410 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 FASTKD3Q14CZ7 662 aaKnown RBP17.77■□□□□ 0.44
UPF3A-206ENST00000480362 MYLK3Q32MK0 819 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 FNDC3BQ53EP0 1204 aaKnown RBP17.77■□□□□ 0.44
UPF3A-206ENST00000480362 DNAJC21Q5F1R6 531 aaKnown RBP17.77■□□□□ 0.44
UPF3A-206ENST00000480362 DENND5AQ6IQ26 1287 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 TXNDC11Q6PKC3 985 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 Q6ZVU0 165 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 RALGPS2Q86X27 583 aaPredicted RBP17.77■□□□□ 0.44
UPF3A-206ENST00000480362 RELL1Q8IUW5 271 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 ANKMY2Q8IV38 441 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 SUGP1Q8IWZ8 645 aaKnown RBP17.77■□□□□ 0.44
UPF3A-206ENST00000480362 ZBED8Q8IZ13 594 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 SLC25A41Q8N5S1 370 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 OR6K2Q8NGY2 324 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 IFT43Q96FT9 208 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 FEM1CQ96JP0 617 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 SIGLEC10Q96LC7 697 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 SEMA4AQ9H3S1 761 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 HECAQ9UBI9 543 aaPredicted RBP17.77■□□□□ 0.44
UPF3A-206ENST00000480362 RAI2Q9Y5P3 530 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 PIAS3Q9Y6X2 628 aa17.77■□□□□ 0.44
UPF3A-206ENST00000480362 COL4A2P08572 1712 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.76■□□□□ 0.43
UPF3A-206ENST00000480362 SDR42E2A6NKP2 422 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 AP3B1O00203 1094 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 EPOP01588 193 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 TPH1P17752 444 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 MGAT1P26572 445 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 ELK3P41970 407 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 TNFRSF4P43489 277 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 CHRNA4P43681 627 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 MAPK8P45983 427 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 NPY2RP49146 381 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 PFKPQ01813 784 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 TRMT10CQ7L0Y3 403 aaKnown RBP17.76■□□□□ 0.43
UPF3A-206ENST00000480362 ADHFE1Q8IWW8 467 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 PLPP6Q8IY26 295 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 AGGF1Q8N302 714 aaeCLIP17.76■□□□□ 0.43
UPF3A-206ENST00000480362 MPP5Q8N3R9 675 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 MREGQ8N565 214 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 KDM1BQ8NB78 822 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 C9orf72Q96LT7 481 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 CDC42EP4Q9H3Q1 356 aaKnown RBP17.76■□□□□ 0.43
UPF3A-206ENST00000480362 MTG2Q9H4K7 406 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 ARNT2Q9HBZ2 717 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 CHKBQ9Y259 395 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 TEX264Q9Y6I9 313 aa17.76■□□□□ 0.43
UPF3A-206ENST00000480362 ANTXRLA6NF34 631 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms