RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 PMS2CLQ68D20 193 aa19.98■□□□□ 0.79
LIME1-205ENST00000480139 GDPD4Q6W3E5 623 aa19.98■□□□□ 0.79
LIME1-205ENST00000480139 ZC3H18Q86VM9 953 aaKnown RBP19.98■□□□□ 0.79
LIME1-205ENST00000480139 SLC13A5Q86YT5 568 aaPredicted RBP19.98■□□□□ 0.79
LIME1-205ENST00000480139 LRRN4Q8WUT4 740 aa19.98■□□□□ 0.79
LIME1-205ENST00000480139 ARRDC3Q96B67 414 aa19.98■□□□□ 0.79
LIME1-205ENST00000480139 NEUROG2Q9H2A3 272 aa19.98■□□□□ 0.79
LIME1-205ENST00000480139 KDM4CQ9H3R0 1056 aa19.98■□□□□ 0.79
LIME1-205ENST00000480139 ATP13A3Q9H7F0 1226 aa19.98■□□□□ 0.79
LIME1-205ENST00000480139 NT5MQ9NPB1 228 aa19.98■□□□□ 0.79
LIME1-205ENST00000480139 DKK3Q9UBP4 350 aa19.98■□□□□ 0.79
LIME1-205ENST00000480139 RAPGEFL1Q9UHV5 662 aa19.98■□□□□ 0.79
LIME1-205ENST00000480139 INVSQ9Y283 1065 aa19.98■□□□□ 0.79
LIME1-205ENST00000480139 TSPAN11A1L157 253 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 RNF103O00237 685 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 ENC1O14682 589 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 INSIG1O15503 277 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 MAP3K13O43283 966 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 NEBLO76041 1014 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 RHOBTB1O94844 696 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 UGT2B4P06133 528 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 SERPINA4P29622 427 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 SCNN1BP51168 640 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 CNTN1Q12860 1018 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 ZBTB17Q13105 803 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 ELF2Q15723 593 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 PIP5KL1Q5T9C9 394 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 NCEH1Q6PIU2 408 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 ERN2Q76MJ5 926 aaKnown RBP19.97■□□□□ 0.79
LIME1-205ENST00000480139 CADM4Q8NFZ8 388 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 GANCQ8TET4 914 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 SPOCK2Q92563 424 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 VAT1Q99536 393 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 FRMD8P1Q9BZ68 369 aaPredicted RBP19.97■□□□□ 0.79
LIME1-205ENST00000480139 DUSP15Q9H1R2 295 aaPredicted RBP19.97■□□□□ 0.79
LIME1-205ENST00000480139 SCUBE2Q9NQ36 999 aa19.97■□□□□ 0.79
LIME1-205ENST00000480139 TNRC6BQ9UPQ9 1833 aaKnown RBP19.97■□□□□ 0.79
LIME1-205ENST00000480139 THADAQ6YHU6 1953 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 C10orf142B7Z368 130 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 PLRG1O43660 514 aaKnown RBP19.96■□□□□ 0.79
LIME1-205ENST00000480139 SOCS5O75159 536 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 NDUFS2O75306 463 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 SEMA4FO95754 770 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 JCHAINP01591 159 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 HLA-DQB2P05538 268 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 RBP3P10745 1247 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 ACSL1P33121 698 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 NEK3P51956 506 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 ADPRHP54922 357 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 EIF3EP60228 445 aaKnown RBP19.96■□□□□ 0.79
LIME1-205ENST00000480139 RPL6Q02878 288 aaKnown RBP19.96■□□□□ 0.79
LIME1-205ENST00000480139 TEX44Q53QW1 395 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 PARS2Q7L3T8 475 aaKnown RBP19.96■□□□□ 0.79
LIME1-205ENST00000480139 LPCAT2Q7L5N7 544 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 FAM124AQ86V42 546 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 CDKL3Q8IVW4 592 aaPredicted RBP19.96■□□□□ 0.79
LIME1-205ENST00000480139 CNTD1Q8N815 330 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 SUMF1Q8NBK3 374 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 HTR3CQ8WXA8 447 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 RAB7BQ96AH8 199 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 LOXL4Q96JB6 756 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 PBKQ96KB5 322 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 KLHL32Q96NJ5 620 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 FERMT1Q9BQL6 677 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 SUV39H2Q9H5I1 410 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 RAB23Q9ULC3 237 aa19.96■□□□□ 0.79
LIME1-205ENST00000480139 SMG5Q9UPR3 1016 aaKnown RBP19.96■□□□□ 0.79
LIME1-205ENST00000480139 TCRBV7S2A1N4TA0A589 114 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 BCLAF3A2AJT9 711 aaKnown RBP19.95■□□□□ 0.78
LIME1-205ENST00000480139 LRRC72A6NJI9 287 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 C16orf96A6NNT2 1141 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 H7C0C1 242 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 GJB3O75712 270 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 ATP1A1P05023 1023 aaKnown RBP19.95■□□□□ 0.78
LIME1-205ENST00000480139 ADRB3P13945 408 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 PTPN3P26045 913 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 ATP5OP48047 213 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 SUOXP51687 545 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 MAXP61244 160 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 BCL2L1Q07817 233 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 WASHC5Q12768 1159 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 POM121L1PQ3SYA9 428 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 LAIR1Q6GTX8 287 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 BRAT1Q6PJG6 821 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.95■□□□□ 0.78
LIME1-205ENST00000480139 PRR23BQ6ZRT6 265 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 OR2T34Q8NGX1 318 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 SLC35B2Q8TB61 432 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 ARRDC2Q8TBH0 407 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 MAIP1Q8WWC4 291 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 FOXJ1Q92949 421 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 ECHDC3Q96DC8 303 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 SEMA3CQ99985 751 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 NOD2Q9HC29 1040 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 TPX2Q9ULW0 747 aaKnown RBP19.95■□□□□ 0.78
LIME1-205ENST00000480139 ZKSCAN5Q9Y2L8 839 aa19.95■□□□□ 0.78
LIME1-205ENST00000480139 A0A1W2PQ67 120 aa19.94■□□□□ 0.78
LIME1-205ENST00000480139 CES2O00748 559 aa19.94■□□□□ 0.78
LIME1-205ENST00000480139 TRAFD1O14545 582 aaPredicted RBP19.94■□□□□ 0.78
LIME1-205ENST00000480139 HTRA2O43464 458 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms