RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 RRN3Q9NYV6 651 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 FLRT1Q9NZU1 646 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 GTF2IRD1Q9UHL9 959 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 FIS1Q9Y3D6 152 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 PRORSD1PA6NEY8 169 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 YJEFN3A6XGL0 299 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 ZNF487B1APH4 448 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 TADA2AO75478 443 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 GNAO1P09471 354 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 HOXD8P13378 290 aaPredicted RBP13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 STRADAQ7RTN6 431 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 TMEM135Q86UB9 458 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 NPWQ8N729 165 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 DNAAF3Q8N9W5 541 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 MIPOL1Q8TD10 442 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 ASB9Q96DX5 294 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 UBP1Q9NZI7 540 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 ADAM28Q9UKQ2 775 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 VANGL2Q9ULK5 521 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 IPPQ9Y573 584 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 PLXNA1Q9UIW2 1896 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 PTGESO14684 152 aa13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 MPOP05164 745 aa13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 VARSP26640 1264 aaKnown RBP13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 TAF6P49848 677 aa13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 PSME3P61289 254 aa13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 PRAMEP78395 509 aa13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 IFRD2Q12894 506 aaPredicted RBP13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 MPP3Q13368 585 aa13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 C16orf72Q14CZ0 275 aa13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 ZYG11AQ6WRX3 759 aa13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 CLEC20AQ6ZU45 233 aa13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 HERC6Q8IVU3 1022 aa13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 BBS5Q8N3I7 341 aa13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 FIBCD1Q8N539 461 aa13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 NPY6RQ99463 290 aa13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 HAUS8Q9BT25 410 aa13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 DUSP16Q9BY84 665 aa13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 LRRC40Q9H9A6 602 aa13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 GDAP2Q9NXN4 497 aa13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 THEGQ9P2T0 379 aa13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 FAF1Q9UNN5 650 aaPredicted RBP13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 ZNF711Q9Y462 761 aa13.46□□□□□ -0.25
PDZRN3-208ENST00000479530 TRIM38O00635 465 aa13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 HUS1O60921 280 aa13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 SUPT3HO75486 399 aa13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 TRIM25Q14258 630 aaKnown RBP13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 SMYD5Q6GMV2 418 aa13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 KRT80Q6KB66 452 aa13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 DNAJC14Q6Y2X3 702 aaPredicted RBP13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 RPS27LQ71UM5 84 aaKnown RBP13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 KCNMB4Q86W47 210 aa13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 FSTL5Q8N475 847 aaPredicted RBP13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 CCNYL1Q8N7R7 359 aa13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 FAM47BQ8NA70 645 aa13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 KDM1BQ8NB78 822 aa13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 LPGAT1Q92604 370 aa13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 RMND5BQ96G75 393 aaPredicted RBP13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 SCYL1Q96KG9 808 aa13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 HSFY1Q96LI6 401 aa13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 DUS2Q9NX74 493 aaKnown RBP13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 SFMBT1Q9UHJ3 866 aa13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 BCAP29Q9UHQ4 241 aa13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 CNOT11Q9UKZ1 510 aaKnown RBP13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 CDC14AQ9UNH5 594 aa13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 MYRFQ9Y2G1 1151 aa13.46□□□□□ -0.26
PDZRN3-208ENST00000479530 HTTP42858 3142 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 MYBPHLA2RUH7 354 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 HACD1B0YJ81 288 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 SOCS2O14508 198 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 DLX3O60479 287 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 TKTL1P51854 596 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 PRKAA1Q13131 559 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 GRB14Q14449 540 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 PITRM1Q5JRX3 1037 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 LAYNQ6UX15 382 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 CENPLQ8N0S6 344 aaPredicted RBP13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 EDEM1Q92611 657 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 SGF29Q96ES7 293 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 SLC39A3Q9BRY0 314 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 MCMBPQ9BTE3 642 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 ULBP1Q9BZM6 244 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 ABHD16BQ9H3Z7 469 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 TNFRSF12AQ9NP84 129 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 CRTAC1Q9NQ79 661 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 KLHL8Q9P2G9 620 aaPredicted RBP13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 RUVBL2Q9Y230 463 aaKnown RBP13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 FBP2O00757 339 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 HTRA2O43464 458 aaPredicted RBP13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 TIPRLO75663 272 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 TOMM70O94826 608 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 HNRNPLP14866 589 aaKnown RBP eCLIP13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 ERCC2P18074 760 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 NMBRP28336 390 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 PDAP1Q13442 181 aaKnown RBP13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 DPYSQ14117 519 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 RFTN1Q14699 578 aaPredicted RBP13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 ADRM1Q16186 407 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 CCL14Q16627 93 aa13.45□□□□□ -0.26
PDZRN3-208ENST00000479530 TSTD2Q5T7W7 516 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms