RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 TFEBP19484 476 aa21.45■■□□□ 1.02
SDF4-206ENST00000478938 ARCN1P48444 511 aaKnown RBP21.45■■□□□ 1.02
SDF4-206ENST00000478938 CLCNKBP51801 687 aa21.45■■□□□ 1.02
SDF4-206ENST00000478938 WNT7BP56706 349 aa21.45■■□□□ 1.02
SDF4-206ENST00000478938 MPP1Q00013 466 aa21.45■■□□□ 1.02
SDF4-206ENST00000478938 IRF9Q00978 393 aa21.45■■□□□ 1.02
SDF4-206ENST00000478938 NIPAL4Q0D2K0 466 aa21.45■■□□□ 1.02
SDF4-206ENST00000478938 KIZQ2M2Z5 673 aa21.45■■□□□ 1.02
SDF4-206ENST00000478938 REP15Q6BDI9 236 aa21.45■■□□□ 1.02
SDF4-206ENST00000478938 PMF1Q6P1K2 205 aa21.45■■□□□ 1.02
SDF4-206ENST00000478938 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.45■■□□□ 1.02
SDF4-206ENST00000478938 SNX15Q9NRS6 342 aa21.45■■□□□ 1.02
SDF4-206ENST00000478938 TJP2Q9UDY2 1190 aa21.45■■□□□ 1.02
SDF4-206ENST00000478938 SPEF1Q9Y4P9 236 aa21.45■■□□□ 1.02
SDF4-206ENST00000478938 PMF1-BGLAPU3KQ54 211 aa21.45■■□□□ 1.02
SDF4-206ENST00000478938 LRRIQ4A6NIV6 560 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 ABCB7O75027 752 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 MAGEA3P43357 314 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 MCCD1P59942 119 aaPredicted RBP21.44■■□□□ 1.02
SDF4-206ENST00000478938 LAMC2Q13753 1193 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 ARHGEF6Q15052 776 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 HADHQ16836 314 aaKnown RBP21.44■■□□□ 1.02
SDF4-206ENST00000478938 ANO4Q32M45 955 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 ARL13AQ5H913 290 aaPredicted RBP21.44■■□□□ 1.02
SDF4-206ENST00000478938 FKBP9P1Q75LS8 142 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 LINC00523Q86TU6 105 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 DDIASQ8IXT1 998 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 SP140LQ9H930 580 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.44■■□□□ 1.02
SDF4-206ENST00000478938 CCM2LQ9NUG4 571 aaPredicted RBP21.44■■□□□ 1.02
SDF4-206ENST00000478938 MTMR10Q9NXD2 777 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 TBX20Q9UMR3 447 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 EIF3LQ9Y262 564 aaKnown RBP21.44■■□□□ 1.02
SDF4-206ENST00000478938 RAP2CQ9Y3L5 183 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 SYCE1LA8MT33 242 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 SHMT2P34897 504 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 LSM3P62310 102 aaKnown RBP21.44■■□□□ 1.02
SDF4-206ENST00000478938 CNTN2Q02246 1040 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 GABPAQ06546 454 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 ILF2Q12905 390 aaKnown RBP21.44■■□□□ 1.02
SDF4-206ENST00000478938 CBLBQ13191 982 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 FXNQ16595 210 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 AASDHQ4L235 1098 aaPredicted RBP21.44■■□□□ 1.02
SDF4-206ENST00000478938 TDRD10Q5VZ19 366 aaKnown RBP21.44■■□□□ 1.02
SDF4-206ENST00000478938 TWF2Q6IBS0 349 aaKnown RBP21.44■■□□□ 1.02
SDF4-206ENST00000478938 USP51Q70EK9 711 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 FBXO11Q86XK2 927 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 PQLC3Q8N755 202 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 SHCBP1Q8NEM2 672 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 MUS81Q96NY9 551 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 ADNPQ9H2P0 1102 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 TRIM39Q9HCM9 518 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 MAU2Q9Y6X3 613 aa21.44■■□□□ 1.02
SDF4-206ENST00000478938 TMEM233B4DJY2 109 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 RAD51BO15315 384 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 MAN1A2O60476 641 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 TOMM70O94826 608 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 ARP10275 920 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 OXTRP30559 389 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 SLC7A2P52569 658 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 MRPS15P82914 257 aaKnown RBP21.43■■□□□ 1.02
SDF4-206ENST00000478938 ACAP2Q15057 778 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 PDK2Q15119 407 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 NPTX1Q15818 432 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 GEN1Q17RS7 908 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 SPRED1Q7Z699 444 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 SPPL2CQ8IUH8 684 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 HACE1Q8IYU2 909 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 SPARTQ8N0X7 666 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 POC5Q8NA72 575 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 YTHDF1Q9BYJ9 559 aaKnown RBP21.43■■□□□ 1.02
SDF4-206ENST00000478938 C2orf40Q9H1Z8 148 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 DDX28Q9NUL7 540 aaKnown RBP21.43■■□□□ 1.02
SDF4-206ENST00000478938 GGA1Q9UJY5 639 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 DHRS12A0PJE2 317 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 ERVH48-1M5A8F1 160 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 METTL18O95568 372 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 AXLP30530 894 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 SLC12A1Q13621 1099 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 TJAP1Q5JTD0 557 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 DESI1Q6ICB0 168 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 C15orf39Q6ZRI6 1047 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 OTOP3Q7RTS5 596 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 LYSMD2Q8IV50 215 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 OR6Q1Q8NGQ2 317 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 ANGPTL6Q8NI99 470 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 HMGCLL1Q8TB92 370 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 ATL1Q8WXF7 558 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 MAP6Q96JE9 813 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 CHID1Q9BWS9 393 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 DHX35Q9H5Z1 703 aaKnown RBP21.43■■□□□ 1.02
SDF4-206ENST00000478938 IRS2Q9Y4H2 1338 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 GSNP06396 782 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 FASP25445 335 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 RPS9P46781 194 aaKnown RBP21.43■■□□□ 1.02
SDF4-206ENST00000478938 TRIM71Q2Q1W2 868 aaKnown RBP21.43■■□□□ 1.02
SDF4-206ENST00000478938 ZIK1Q3SY52 487 aaPredicted RBP21.43■■□□□ 1.02
SDF4-206ENST00000478938 PRR23CQ6ZRP0 262 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 RSAD1Q9HA92 442 aa21.43■■□□□ 1.02
SDF4-206ENST00000478938 SPC25Q9HBM1 224 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms