RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 KIF1CO43896 1103 aaKnown RBP5.4□□□□□ -1.54
UPF3B-203ENST00000478840 TFP02787 698 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 SLC2A4P14672 509 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 GLULP15104 373 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 ST6GAL1P15907 406 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 TFEBP19484 476 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 TBXAS1P24557 533 aaPredicted RBP5.4□□□□□ -1.54
UPF3B-203ENST00000478840 YWHAQP27348 245 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 RYKP34925 604 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 CACNA2D1P54289 1103 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 HDAC4P56524 1084 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 PSMC6P62333 389 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 PKP1Q13835 747 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 GALNT3Q14435 633 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 FGFBP1Q14512 234 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 NTRK2Q16620 822 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 ASTE1Q2TB18 679 aaPredicted RBP5.4□□□□□ -1.54
UPF3B-203ENST00000478840 SPATS1Q496A3 300 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 SOWAHCQ53LP3 525 aaPredicted RBP5.4□□□□□ -1.54
UPF3B-203ENST00000478840 C1QTNF12Q5T7M4 302 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 TSTD2Q5T7W7 516 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 TSSK4Q6SA08 328 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 GLDNQ6ZMI3 551 aaPredicted RBP5.4□□□□□ -1.54
UPF3B-203ENST00000478840 ARL14EPQ8N8R7 260 aaPredicted RBP5.4□□□□□ -1.54
UPF3B-203ENST00000478840 CLMNQ96JQ2 1002 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 OR10A4Q9H209 315 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 PDZD7Q9H5P4 517 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 SLC6A13Q9NSD5 602 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 RRP7BPQ9NSQ0 103 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 PLK2Q9NYY3 685 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 SERGEFQ9UGK8 458 aa5.4□□□□□ -1.54
UPF3B-203ENST00000478840 BTBD18B2RXH4 712 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 IFNL4K9M1U5 179 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 HCRTR2O43614 444 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 NEURL1O76050 574 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 MT-CYBP00156 380 aaPredicted RBP5.39□□□□□ -1.55
UPF3B-203ENST00000478840 RB1P06400 928 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 CYP2A6P11509 494 aaPredicted RBP5.39□□□□□ -1.55
UPF3B-203ENST00000478840 SELLP14151 372 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 CLDN2P57739 230 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 LRMPQ12912 555 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 VEPH1Q14D04 833 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 PCLAFQ15004 111 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 CERKLQ49MI3 558 aaPredicted RBP5.39□□□□□ -1.55
UPF3B-203ENST00000478840 SYTL3Q4VX76 610 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 HECTD2Q5U5R9 776 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 CPLX2Q6PUV4 134 aaKnown RBP5.39□□□□□ -1.55
UPF3B-203ENST00000478840 Q6ZPA2 131 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 TRIM74Q86UV6 250 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 TRIM73Q86UV7 250 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 POC5Q8NA72 575 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 KAT2AQ92830 837 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 SLC22A18Q96BI1 424 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 ACTR5Q9H9F9 607 aaPredicted RBP5.39□□□□□ -1.55
UPF3B-203ENST00000478840 ZNF304Q9HCX3 659 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 MRPL15Q9P015 296 aaKnown RBP5.39□□□□□ -1.55
UPF3B-203ENST00000478840 SH3BP4Q9P0V3 963 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 CARD8Q9Y2G2 431 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 FAM169AQ9Y6X4 670 aa5.39□□□□□ -1.55
UPF3B-203ENST00000478840 CYP2D7A0A087X1C5 515 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 SLC22A23A1A5C7 686 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 GLOD5A6NK44 160 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 INPPL1O15357 1258 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 RNMTO43148 476 aaKnown RBP5.38□□□□□ -1.55
UPF3B-203ENST00000478840 SEC14L5O43304 696 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 NDUFS3O75489 264 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 NFATC1O95644 943 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 WNT1P04628 370 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 APOA4P06727 396 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 EDN2P20800 178 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 MCM7P33993 719 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 CLCNKBP51801 687 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 SLC12A2P55011 1212 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 PGM5Q15124 567 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 KYNUQ16719 465 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 CXorf66Q5JRM2 361 aaPredicted RBP5.38□□□□□ -1.55
UPF3B-203ENST00000478840 LRIG3Q6UXM1 1119 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 TBC1D26Q86UD7 250 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 CHSY1Q86X52 802 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 TMC8Q8IU68 726 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 CADM3Q8N126 398 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 GPR150Q8NGU9 434 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 SH3RF3Q8TEJ3 882 aaPredicted RBP5.38□□□□□ -1.55
UPF3B-203ENST00000478840 PRPF31Q8WWY3 499 aaKnown RBP5.38□□□□□ -1.55
UPF3B-203ENST00000478840 SARAFQ96BY9 339 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 ARHGEF26Q96DR7 871 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 CNDP2Q96KP4 475 aaKnown RBP5.38□□□□□ -1.55
UPF3B-203ENST00000478840 FIZ1Q96SL8 496 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 NCAPGQ9BPX3 1015 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 ALDH8A1Q9H2A2 487 aaPredicted RBP5.38□□□□□ -1.55
UPF3B-203ENST00000478840 FBXL17Q9UF56 701 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 SLC8A2Q9UPR5 921 aa5.38□□□□□ -1.55
UPF3B-203ENST00000478840 MAGED1Q9Y5V3 778 aaPredicted RBP5.38□□□□□ -1.55
UPF3B-203ENST00000478840 TRBV5-7A0A0A0MS05 114 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 OR2A25A4D2G3 310 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 SAT1P21673 171 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 KLRC2P26717 231 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 SLC15A1P46059 708 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 MRPL12P52815 198 aaKnown RBP5.37□□□□□ -1.55
UPF3B-203ENST00000478840 F2RL1P55085 397 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms