RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 RXRGP48443 463 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 GEMIN4P57678 1058 aaKnown RBP16.05■□□□□ 0.16
GARNL3-215ENST00000478702 C19orf57Q0VDD7 668 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 POLD3Q15054 466 aaPredicted RBP16.05■□□□□ 0.16
GARNL3-215ENST00000478702 ERMARDQ5T6L9 678 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 AGBL4Q5VU57 503 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 PSTKQ8IV42 348 aaKnown RBP16.05■□□□□ 0.16
GARNL3-215ENST00000478702 UMODL1-AS1Q8N2C9 162 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 NIPA2Q8N8Q9 360 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 OR8K1Q8NGG5 319 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 OR14C36Q8NHC7 312 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 SNIP1Q8TAD8 396 aaKnown RBP16.05■□□□□ 0.16
GARNL3-215ENST00000478702 ARHGEF26Q96DR7 871 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 SERAC1Q96JX3 654 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 KCTD15Q96SI1 283 aaPredicted RBP16.05■□□□□ 0.16
GARNL3-215ENST00000478702 TNKS2Q9H2K2 1166 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 ERVMER34-1Q9H9K5 563 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 ASH1LQ9NR48 2969 aaKnown RBP16.05■□□□□ 0.16
GARNL3-215ENST00000478702 ABHD10Q9NUJ1 306 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 PCSK1NQ9UHG2 260 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 FCF1Q9Y324 198 aaKnown RBP16.05■□□□□ 0.16
GARNL3-215ENST00000478702 FARP1Q9Y4F1 1045 aaPredicted RBP16.05■□□□□ 0.16
GARNL3-215ENST00000478702 AK5Q9Y6K8 562 aa16.05■□□□□ 0.16
GARNL3-215ENST00000478702 TRPM6Q9BX84 2022 aa16.04■□□□□ 0.16
GARNL3-215ENST00000478702 SSU72P8A0A1W2PR75 194 aa16.04■□□□□ 0.16
GARNL3-215ENST00000478702 ZSCAN5CA6NGD5 496 aaPredicted RBP16.04■□□□□ 0.16
GARNL3-215ENST00000478702 TK2O00142 265 aa16.04■□□□□ 0.16
GARNL3-215ENST00000478702 EEF2KO00418 725 aaKnown RBP16.04■□□□□ 0.16
GARNL3-215ENST00000478702 PRNPP04156 253 aa16.04■□□□□ 0.16
GARNL3-215ENST00000478702 TPM1P09493 284 aa16.04■□□□□ 0.16
GARNL3-215ENST00000478702 CHRNA3P32297 505 aa16.04■□□□□ 0.16
GARNL3-215ENST00000478702 RECQLP46063 649 aaPredicted RBP16.04■□□□□ 0.16
GARNL3-215ENST00000478702 ARRB1P49407 418 aaPredicted RBP16.04■□□□□ 0.16
GARNL3-215ENST00000478702 YBEYP58557 167 aaPredicted RBP16.04■□□□□ 0.16
GARNL3-215ENST00000478702 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
GARNL3-215ENST00000478702 SLC18A3Q16572 532 aa16.04■□□□□ 0.16
GARNL3-215ENST00000478702 ASTE1Q2TB18 679 aaPredicted RBP16.04■□□□□ 0.16
GARNL3-215ENST00000478702 PARP15Q460N3 678 aa16.04■□□□□ 0.16
GARNL3-215ENST00000478702 CCDC122Q5T0U0 273 aa16.04■□□□□ 0.16
GARNL3-215ENST00000478702 LRRC69Q6ZNQ3 347 aa16.04■□□□□ 0.16
GARNL3-215ENST00000478702 DPY19L3Q6ZPD9 716 aa16.04■□□□□ 0.16
GARNL3-215ENST00000478702 CHST14Q8NCH0 376 aa16.04■□□□□ 0.16
GARNL3-215ENST00000478702 TMIEQ8NEW7 156 aa16.04■□□□□ 0.16
GARNL3-215ENST00000478702 GRIN3AQ8TCU5 1115 aa16.04■□□□□ 0.16
GARNL3-215ENST00000478702 ISG20Q96AZ6 181 aaKnown RBP16.04■□□□□ 0.16
GARNL3-215ENST00000478702 NUP85Q9BW27 656 aa16.04■□□□□ 0.16
GARNL3-215ENST00000478702 ANAPC7Q9UJX3 599 aa16.04■□□□□ 0.16
GARNL3-215ENST00000478702 ACTL7AQ9Y615 435 aa16.04■□□□□ 0.16
GARNL3-215ENST00000478702 WASF2Q9Y6W5 498 aa16.04■□□□□ 0.16
GARNL3-215ENST00000478702 RASA4BC9J798 803 aa16.03■□□□□ 0.16
GARNL3-215ENST00000478702 RASA4O43374 803 aa16.03■□□□□ 0.16
GARNL3-215ENST00000478702 PLRG1O43660 514 aaKnown RBP16.03■□□□□ 0.16
GARNL3-215ENST00000478702 KDELR3O43731 214 aa16.03■□□□□ 0.16
GARNL3-215ENST00000478702 TCF4P15884 667 aa16.03■□□□□ 0.16
GARNL3-215ENST00000478702 IL1R2P27930 398 aa16.03■□□□□ 0.16
GARNL3-215ENST00000478702 ZNF135P52742 658 aaPredicted RBP16.03■□□□□ 0.16
GARNL3-215ENST00000478702 CNTN1Q12860 1018 aa16.03■□□□□ 0.16
GARNL3-215ENST00000478702 PIGHQ14442 188 aaPredicted RBP16.03■□□□□ 0.16
GARNL3-215ENST00000478702 POM121L1PQ3SYA9 428 aa16.03■□□□□ 0.16
GARNL3-215ENST00000478702 NAPEPLDQ6IQ20 393 aa16.03■□□□□ 0.16
GARNL3-215ENST00000478702 PCSK4Q6UW60 755 aa16.03■□□□□ 0.16
GARNL3-215ENST00000478702 RFX8Q6ZV50 586 aa16.03■□□□□ 0.16
GARNL3-215ENST00000478702 MFSD2AQ8NA29 543 aa16.03■□□□□ 0.16
GARNL3-215ENST00000478702 RFFLQ8WZ73 363 aa16.03■□□□□ 0.16
GARNL3-215ENST00000478702 ARRDC3Q96B67 414 aa16.03■□□□□ 0.16
GARNL3-215ENST00000478702 HMCESQ96FZ2 354 aa16.03■□□□□ 0.16
GARNL3-215ENST00000478702 FCRL3Q96P31 734 aaPredicted RBP16.03■□□□□ 0.16
GARNL3-215ENST00000478702 LRRC19Q9H756 370 aa16.03■□□□□ 0.16
GARNL3-215ENST00000478702 ZNHIT6Q9NWK9 470 aaKnown RBP16.03■□□□□ 0.16
GARNL3-215ENST00000478702 IL36AQ9UHA7 158 aa16.03■□□□□ 0.16
GARNL3-215ENST00000478702 TPX2Q9ULW0 747 aaKnown RBP16.03■□□□□ 0.16
GARNL3-215ENST00000478702 HPCAL4Q9UM19 191 aa16.03■□□□□ 0.16
GARNL3-215ENST00000478702 COL6A6A6NMZ7 2263 aa16.03■□□□□ 0.16
GARNL3-215ENST00000478702 KIF26BQ2KJY2 2108 aa16.03■□□□□ 0.16
GARNL3-215ENST00000478702 ATMQ13315 3056 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 TBC1D3DA0A087WVF3 549 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 TBC1D3IA0A087WXS9 549 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 TBC1D3EA0A087X179 549 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 TBC1D3KA0A087X1G2 549 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 TBC1D3FA6NER0 549 aaPredicted RBP16.02■□□□□ 0.16
GARNL3-215ENST00000478702 TBC1D3LB9A6J9 549 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 KPNA3O00505 521 aaPredicted RBP16.02■□□□□ 0.16
GARNL3-215ENST00000478702 BRINP1O60477 761 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 GSRP00390 522 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 TBC1D3HP0C7X1 549 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 CKMT2P17540 419 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 CCNHP51946 323 aaPredicted RBP16.02■□□□□ 0.16
GARNL3-215ENST00000478702 INSM1Q01101 510 aaPredicted RBP16.02■□□□□ 0.16
GARNL3-215ENST00000478702 SLC25A11Q02978 314 aaKnown RBP16.02■□□□□ 0.16
GARNL3-215ENST00000478702 TBX2Q13207 712 aaPredicted RBP16.02■□□□□ 0.16
GARNL3-215ENST00000478702 ILKQ13418 452 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 SERINC3Q13530 473 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 DPYSL2Q16555 572 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 PROX2Q3B8N5 592 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 SLC45A4Q5BKX6 768 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 CARD16Q5EG05 197 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 PPP6R3Q5H9R7 873 aaPredicted RBP16.02■□□□□ 0.16
GARNL3-215ENST00000478702 PIP5KL1Q5T9C9 394 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 TBC1D3GQ6DHY5 549 aa16.02■□□□□ 0.16
GARNL3-215ENST00000478702 TBC1D3CQ6IPX1 549 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms