RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 KRIT1O00522 736 aa16.96■□□□□ 0.31
TRIM13-208ENST00000478111 ATXN7O15265 892 aaPredicted RBP16.96■□□□□ 0.31
TRIM13-208ENST00000478111 LZTS3O60299 673 aaPredicted RBP16.96■□□□□ 0.31
TRIM13-208ENST00000478111 C1QL1O75973 258 aa16.96■□□□□ 0.31
TRIM13-208ENST00000478111 MPOP05164 745 aa16.96■□□□□ 0.31
TRIM13-208ENST00000478111 UGT2B4P06133 528 aa16.96■□□□□ 0.31
TRIM13-208ENST00000478111 PLEKP08567 350 aaPredicted RBP16.96■□□□□ 0.31
TRIM13-208ENST00000478111 RFC1P35251 1148 aaPredicted RBP16.96■□□□□ 0.31
TRIM13-208ENST00000478111 DUSP3P51452 185 aaPredicted RBP16.96■□□□□ 0.31
TRIM13-208ENST00000478111 SGCGQ13326 291 aa16.96■□□□□ 0.31
TRIM13-208ENST00000478111 MYLK3Q32MK0 819 aa16.96■□□□□ 0.31
TRIM13-208ENST00000478111 CT47A1Q5JQC4 288 aaPredicted RBP16.96■□□□□ 0.31
TRIM13-208ENST00000478111 ATXN7L2Q5T6C5 722 aaPredicted RBP16.96■□□□□ 0.31
TRIM13-208ENST00000478111 CDKAL1Q5VV42 579 aa16.96■□□□□ 0.31
TRIM13-208ENST00000478111 ZCCHC8Q6NZY4 707 aaKnown RBP16.96■□□□□ 0.31
TRIM13-208ENST00000478111 RYBPQ8N488 228 aaPredicted RBP16.96■□□□□ 0.31
TRIM13-208ENST00000478111 DENND6BQ8NEG7 585 aa16.96■□□□□ 0.31
TRIM13-208ENST00000478111 IFI44Q8TCB0 444 aa16.96■□□□□ 0.31
TRIM13-208ENST00000478111 SLC39A7Q92504 469 aa16.96■□□□□ 0.31
TRIM13-208ENST00000478111 CENPTQ96BT3 561 aa16.96■□□□□ 0.31
TRIM13-208ENST00000478111 HIC2Q96JB3 615 aa16.96■□□□□ 0.31
TRIM13-208ENST00000478111 KLHL32Q96NJ5 620 aa16.96■□□□□ 0.31
TRIM13-208ENST00000478111 DEPDC7Q96QD5 511 aa16.96■□□□□ 0.31
TRIM13-208ENST00000478111 VPS16Q9H269 839 aa16.96■□□□□ 0.31
TRIM13-208ENST00000478111 TCEAL2Q9H3H9 227 aaPredicted RBP16.96■□□□□ 0.31
TRIM13-208ENST00000478111 CHMP5Q9NZZ3 219 aa16.96■□□□□ 0.31
TRIM13-208ENST00000478111 ASH1LQ9NR48 2969 aaKnown RBP16.96■□□□□ 0.31
TRIM13-208ENST00000478111 A0A1W2PNU3 283 aaPredicted RBP16.95■□□□□ 0.3
TRIM13-208ENST00000478111 TK2O00142 265 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 AQP9O43315 295 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 KDELR3O43731 214 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 RAMP2O60895 175 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 USP12O75317 370 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 CSO75390 466 aaKnown RBP16.95■□□□□ 0.3
TRIM13-208ENST00000478111 DXOO77932 396 aaKnown RBP16.95■□□□□ 0.3
TRIM13-208ENST00000478111 POP4O95707 220 aaKnown RBP16.95■□□□□ 0.3
TRIM13-208ENST00000478111 JUNDP17535 347 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 ITIH2P19823 946 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 TGM2P21980 687 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 SOX5P35711 763 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 LSSP48449 732 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 GSCP56915 257 aaPredicted RBP16.95■□□□□ 0.3
TRIM13-208ENST00000478111 GEMIN4P57678 1058 aaKnown RBP16.95■□□□□ 0.3
TRIM13-208ENST00000478111 POLR2FP61218 127 aaKnown RBP16.95■□□□□ 0.3
TRIM13-208ENST00000478111 SNRPD1P62314 119 aaKnown RBP16.95■□□□□ 0.3
TRIM13-208ENST00000478111 KRT31Q15323 416 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 WDR59Q6PJI9 974 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 PCSK4Q6UW60 755 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 RBFAQ8N0V3 343 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 ENOX1Q8TC92 643 aaKnown RBP16.95■□□□□ 0.3
TRIM13-208ENST00000478111 FAM172AQ8WUF8 416 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 NTAN1Q96AB6 310 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 TBC1D31Q96DN5 1066 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 ZNF578Q96N58 590 aaPredicted RBP16.95■□□□□ 0.3
TRIM13-208ENST00000478111 KLC2Q9H0B6 622 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 NUP62CLQ9H1M0 184 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 NLRC4Q9NPP4 1024 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 IPO11Q9UI26 975 aaKnown RBP16.95■□□□□ 0.3
TRIM13-208ENST00000478111 SALL4Q9UJQ4 1053 aa16.95■□□□□ 0.3
TRIM13-208ENST00000478111 LRP4O75096 1905 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 H3BM21 787 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 GCATO75600 419 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 KRT3P12035 628 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 GABREP78334 506 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 C1QBPQ07021 282 aaKnown RBP16.94■□□□□ 0.3
TRIM13-208ENST00000478111 POLD3Q15054 466 aaPredicted RBP16.94■□□□□ 0.3
TRIM13-208ENST00000478111 ISXQ2M1V0 245 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 DEFB133Q30KQ1 61 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 GUSBP11Q6P575 273 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 GPR155Q7Z3F1 870 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 PYROXD2Q8N2H3 581 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 NETO2Q8NC67 525 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 ZNF248Q8NDW4 579 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 MAPK15Q8TD08 544 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 LMX1AQ8TE12 382 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 OSBPL1AQ9BXW6 950 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 POLR1BQ9H9Y6 1135 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 ASCL3Q9NQ33 180 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 FAM207AQ9NSI2 230 aaPredicted RBP16.94■□□□□ 0.3
TRIM13-208ENST00000478111 HPCAL4Q9UM19 191 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 SIK3Q9Y2K2 1263 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 COL6A6A6NMZ7 2263 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 ANKRD36A6QL64 1941 aa16.94■□□□□ 0.3
TRIM13-208ENST00000478111 TCRBV5S1A1TA0A578 114 aa16.93■□□□□ 0.3
TRIM13-208ENST00000478111 EME2A4GXA9 379 aaPredicted RBP16.93■□□□□ 0.3
TRIM13-208ENST00000478111 NEMP1O14524 444 aa16.93■□□□□ 0.3
TRIM13-208ENST00000478111 TPP1O14773 563 aa16.93■□□□□ 0.3
TRIM13-208ENST00000478111 CASC3O15234 703 aaKnown RBP16.93■□□□□ 0.3
TRIM13-208ENST00000478111 TMCC1O94876 653 aa16.93■□□□□ 0.3
TRIM13-208ENST00000478111 IGFALSP35858 605 aa16.93■□□□□ 0.3
TRIM13-208ENST00000478111 CDKN3Q16667 212 aa16.93■□□□□ 0.3
TRIM13-208ENST00000478111 LRRC73Q5JTD7 316 aa16.93■□□□□ 0.3
TRIM13-208ENST00000478111 GDPD4Q6W3E5 623 aa16.93■□□□□ 0.3
TRIM13-208ENST00000478111 TRIM72Q6ZMU5 477 aa16.93■□□□□ 0.3
TRIM13-208ENST00000478111 EFL1Q7Z2Z2 1120 aaKnown RBP16.93■□□□□ 0.3
TRIM13-208ENST00000478111 TTC7BQ86TV6 843 aa16.93■□□□□ 0.3
TRIM13-208ENST00000478111 PHF13Q86YI8 300 aaPredicted RBP16.93■□□□□ 0.3
TRIM13-208ENST00000478111 LSMEM2Q8N112 164 aa16.93■□□□□ 0.3
TRIM13-208ENST00000478111 LSM14AQ8ND56 463 aaKnown RBP16.93■□□□□ 0.3
TRIM13-208ENST00000478111 ARHGEF26Q96DR7 871 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms