RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 ANLNQ9NQW6 1124 aa20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 PIGVQ9NUD9 493 aa20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 ARHGEF38Q9NXL2 777 aa20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 SIRPGQ9P1W8 387 aa20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 GULP1Q9UBP9 304 aa20.58■□□□□ 0.89
PDLIM1-202ENST00000477757 UTP20O75691 2785 aaKnown RBP20.58■□□□□ 0.88
PDLIM1-202ENST00000477757 USP9XQ93008 2570 aaPredicted RBP20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 A0A1W2PQ27 194 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 A0A1W2PQ64 194 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 CLEC18AA5D8T8 446 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 DRGXA6NNA5 263 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 I6L893 689 aaPredicted RBP20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 TOR1BO14657 336 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 ZNF202O95125 648 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 GNA15P30679 374 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 NOS2P35228 1153 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 CYP4F2P78329 520 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 PPARDQ03181 441 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 SLC20A2Q08357 652 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 PNOCQ13519 176 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 MORC3Q14149 939 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 ELOCQ15369 112 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 BRMS1LQ5PSV4 323 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 OLFML1Q6UWY5 402 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 CLEC18BQ6UXF7 455 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 DTX1Q86Y01 620 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 CLEC18CQ8NCF0 446 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 SCG3Q8WXD2 468 aaKnown RBP20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 TMEM159Q96B96 161 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 CEP63Q96MT8 703 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 FOXJ2Q9P0K8 574 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 DOLKQ9UPQ8 538 aa20.57■□□□□ 0.88
PDLIM1-202ENST00000477757 ILVBLA1L0T0 632 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 C16orf96A6NNT2 1141 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 ALPIP09923 528 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 ITIH1P19827 911 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 CR2P20023 1033 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 OR1E1P30953 314 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 DNA2P51530 1060 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 ARF5P84085 180 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 CCDC40Q4G0X9 1142 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 ZNF783Q6ZMS7 281 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 FAM183BPQ6ZVS7 135 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 VPS36Q86VN1 386 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 ZFAND4Q86XD8 727 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 EHBP1Q8NDI1 1231 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 ZNF564Q8TBZ8 553 aaPredicted RBP20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 ARHGEF26Q96DR7 871 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 CCDC34Q96HJ3 373 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 TKTL2Q9H0I9 626 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 EPN3Q9H201 632 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 LRRN3Q9H3W5 708 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 ACP6Q9NPH0 428 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 MPP6Q9NZW5 540 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 ZNF212Q9UDV6 495 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 FCF1Q9Y324 198 aaKnown RBP20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 PCDHB11Q9Y5F2 797 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 SNX10Q9Y5X0 201 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 UNC79Q9P2D8 2635 aa20.56■□□□□ 0.88
PDLIM1-202ENST00000477757 NOTCH2Q04721 2471 aa20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 NBASA2RRP1 2371 aa20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 IGLV3-10A0A075B6K4 115 aa20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 A0A1W2PQC6 194 aa20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 CD82P27701 267 aa20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 EIF4A3P38919 411 aaKnown RBP20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 CXCR3P49682 368 aa20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 BLKP51451 505 aa20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 KRT85P78386 507 aa20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 ZFP36L1Q07352 338 aaKnown RBP20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 ZNF805Q5CZA5 627 aa20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 LRRC31Q6UY01 552 aa20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 C11orf57Q6ZUT1 292 aaPredicted RBP20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 SLC26A9Q7LBE3 791 aa20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 WDTC1Q8N5D0 677 aa20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 OR6C4Q8NGE1 309 aa20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 SPON2Q9BUD6 331 aa20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 TM6SF2Q9BZW4 377 aa20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 INTS2Q9H0H0 1204 aaKnown RBP20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 ATP13A1Q9HD20 1204 aa20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 HECAQ9UBI9 543 aaPredicted RBP20.55■□□□□ 0.88
PDLIM1-202ENST00000477757 NBPF19A0A087WUL8 3843 aa20.54■□□□□ 0.88
PDLIM1-202ENST00000477757 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.54■□□□□ 0.88
PDLIM1-202ENST00000477757 AREL1O15033 823 aa20.54■□□□□ 0.88
PDLIM1-202ENST00000477757 ETV5P41161 510 aa20.54■□□□□ 0.88
PDLIM1-202ENST00000477757 HK3P52790 923 aa20.54■□□□□ 0.88
PDLIM1-202ENST00000477757 FOXK1P85037 733 aa20.54■□□□□ 0.88
PDLIM1-202ENST00000477757 ARTNQ5T4W7 220 aa20.54■□□□□ 0.88
PDLIM1-202ENST00000477757 CCNJLQ8IV13 435 aa20.54■□□□□ 0.88
PDLIM1-202ENST00000477757 PLPP6Q8IY26 295 aa20.54■□□□□ 0.88
PDLIM1-202ENST00000477757 SNX21Q969T3 373 aa20.54■□□□□ 0.88
PDLIM1-202ENST00000477757 ISG20Q96AZ6 181 aaKnown RBP20.54■□□□□ 0.88
PDLIM1-202ENST00000477757 GSDMAQ96QA5 445 aa20.54■□□□□ 0.88
PDLIM1-202ENST00000477757 NPY6RQ99463 290 aa20.54■□□□□ 0.88
PDLIM1-202ENST00000477757 C1QTNF7Q9BXJ2 289 aa20.54■□□□□ 0.88
PDLIM1-202ENST00000477757 EDEM3Q9BZQ6 932 aa20.54■□□□□ 0.88
PDLIM1-202ENST00000477757 WDCPQ9H6R7 721 aa20.54■□□□□ 0.88
PDLIM1-202ENST00000477757 RRN3Q9NYV6 651 aa20.54■□□□□ 0.88
PDLIM1-202ENST00000477757 GPR34Q9UPC5 381 aa20.54■□□□□ 0.88
PDLIM1-202ENST00000477757 LRP4O75096 1905 aa20.54■□□□□ 0.88
PDLIM1-202ENST00000477757 CXorf51AA0A1B0GTR3 108 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms