RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 CRADDP78560 199 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 SMAD3P84022 425 aaKnown RBP8.03□□□□□ -1.12
VMA21-203ENST00000477649 SLC20A2Q08357 652 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 ITKQ08881 620 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 SLC10A7Q0GE19 358 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 ASPHQ12797 758 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 IFT88Q13099 833 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 SLC12A1Q13621 1099 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 SETDB1Q15047 1291 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 QPCTQ16769 361 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 TAF1BQ53T94 588 aaPredicted RBP8.03□□□□□ -1.12
VMA21-203ENST00000477649 CERCAMQ5T4B2 595 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 MROH9Q5TGP6 573 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 IL31Q6EBC2 164 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 HTR3DQ70Z44 454 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 OTOP2Q7RTS6 562 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 TRPM8Q7Z2W7 1104 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 TMC7Q7Z402 723 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 STRA8Q7Z7C7 330 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 UBE2Q1Q7Z7E8 422 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 NETO2Q8NC67 525 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 SPATA22Q8NHS9 363 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 ARRDC2Q8TBH0 407 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 RDH11Q8TC12 318 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 ACDQ96AP0 544 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 C7orf26Q96N11 449 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 FCRL3Q96P31 734 aaPredicted RBP8.03□□□□□ -1.12
VMA21-203ENST00000477649 KLHL5Q96PQ7 755 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 GPR22Q99680 433 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 MCMBPQ9BTE3 642 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 TUBB6Q9BUF5 446 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 CINPQ9BW66 212 aaPredicted RBP8.03□□□□□ -1.12
VMA21-203ENST00000477649 TRIM55Q9BYV6 548 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 IL21Q9HBE4 155 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 TRPC7Q9HCX4 862 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 CHRAC1Q9NRG0 131 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 TREX1Q9NSU2 369 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.03□□□□□ -1.12
VMA21-203ENST00000477649 TLK1Q9UKI8 766 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 PHTF1Q9UMS5 762 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 RRP15Q9Y3B9 282 aaKnown RBP8.03□□□□□ -1.12
VMA21-203ENST00000477649 SLC4A7Q9Y6M7 1214 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 USH1CQ9Y6N9 552 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 MKI67P46013 3256 aaKnown RBP8.03□□□□□ -1.12
VMA21-203ENST00000477649 GREB1Q4ZG55 1949 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 HMX2A2RU54 273 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 MROH6A6NGR9 719 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 C5orf67F2Z3F1 127 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 F5H423 210 aaPredicted RBP8.02□□□□□ -1.13
VMA21-203ENST00000477649 GOLGA8RI6L899 631 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 GFRA2O00451 464 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 PFDN6O15212 129 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 HNRNPCL1O60812 293 aaKnown RBP8.02□□□□□ -1.13
VMA21-203ENST00000477649 LUC7L3O95232 432 aaKnown RBP8.02□□□□□ -1.13
VMA21-203ENST00000477649 CRTAMO95727 393 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 KLKB1P03952 638 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 CYBBP04839 570 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 BPGMP07738 259 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 ACRP10323 421 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 PSMA3P25788 255 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 HOXD9P28356 352 aaPredicted RBP8.02□□□□□ -1.13
VMA21-203ENST00000477649 SLC6A4P31645 630 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 SLC26A3P40879 764 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 CD86P42081 329 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 SKIV2L2P42285 1042 aaKnown RBP8.02□□□□□ -1.13
VMA21-203ENST00000477649 CLCN5P51795 746 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 HK2P52789 917 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 EPHA5P54756 1037 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 RPL26P61254 145 aaKnown RBP8.02□□□□□ -1.13
VMA21-203ENST00000477649 POU4F1Q01851 419 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 ACVR1Q04771 509 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 TSNAXIP1Q2TAA8 658 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 MPPE1Q53F39 396 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 ARHGAP15Q53QZ3 475 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 HSP90AA5PQ58FG0 334 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 TSTD2Q5T7W7 516 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 RETSATQ6NUM9 610 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 FAM117BQ6P1L5 589 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 FOXR1Q6PIV2 292 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 TMEM150AQ86TG1 271 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 KIRREL3Q8IZU9 778 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 MRPL43Q8N983 215 aaKnown RBP8.02□□□□□ -1.13
VMA21-203ENST00000477649 DCAF4L2Q8NA75 395 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 KLHL23Q8NBE8 558 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 KREMEN2Q8NCW0 462 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 BRSK1Q8TDC3 778 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 CCT6BQ92526 530 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 PTPRN2Q92932 1015 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 E2F7Q96AV8 911 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 MFSD3Q96ES6 412 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 TMA16Q96EY4 203 aaKnown RBP8.02□□□□□ -1.13
VMA21-203ENST00000477649 TSPAN17Q96FV3 270 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 FAM111AQ96PZ2 611 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 NUDCD1Q96RS6 583 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 SEMA3CQ99985 751 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 C2orf49Q9BVC5 232 aaPredicted RBP8.02□□□□□ -1.13
VMA21-203ENST00000477649 TSSK1BQ9BXA7 367 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 ADGRE3Q9BY15 652 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 RABEP2Q9H5N1 569 aa8.02□□□□□ -1.13
VMA21-203ENST00000477649 STN1Q9H668 368 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms