RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 DKK1O94907 266 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 ABL2P42684 1182 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 PAPOLAP51003 745 aaKnown RBP22.06■■□□□ 1.12
COL9A3-211ENST00000477612 RHOAP61586 193 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 DPYSQ14117 519 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 ASTE1Q2TB18 679 aaPredicted RBP22.06■■□□□ 1.12
COL9A3-211ENST00000477612 PPP6R3Q5H9R7 873 aaPredicted RBP22.06■■□□□ 1.12
COL9A3-211ENST00000477612 PRAMEF14Q5SWL7 426 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 ATXN7L2Q5T6C5 722 aaPredicted RBP22.06■■□□□ 1.12
COL9A3-211ENST00000477612 SEL1L3Q68CR1 1132 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 GDPD4Q6W3E5 623 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 LZTR1Q8N653 840 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 OR8K1Q8NGG5 319 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 HCAR2Q8TDS4 363 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 SAP25Q8TEE9 199 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 TEKT4Q8WW24 435 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 ASB12Q8WXK4 309 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 ARHGEF26Q96DR7 871 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 KLHL32Q96NJ5 620 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 NUP85Q9BW27 656 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 SCNM1Q9BWG6 230 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 SLC17A9Q9BYT1 436 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 ZWILCHQ9H900 591 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 TOR4AQ9NXH8 423 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 DKK3Q9UBP4 350 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 HS3ST3A1Q9Y663 406 aa22.06■■□□□ 1.12
COL9A3-211ENST00000477612 UGT2B4P06133 528 aa22.05■■□□□ 1.12
COL9A3-211ENST00000477612 FTH1P19P0C7X4 201 aa22.05■■□□□ 1.12
COL9A3-211ENST00000477612 TCF4P15884 667 aa22.05■■□□□ 1.12
COL9A3-211ENST00000477612 AKT2P31751 481 aa22.05■■□□□ 1.12
COL9A3-211ENST00000477612 EIF4A3P38919 411 aaKnown RBP22.05■■□□□ 1.12
COL9A3-211ENST00000477612 ARRB1P49407 418 aaPredicted RBP22.05■■□□□ 1.12
COL9A3-211ENST00000477612 MAPK8IP2Q13387 824 aaPredicted RBP22.05■■□□□ 1.12
COL9A3-211ENST00000477612 NFKBIBQ15653 356 aa22.05■■□□□ 1.12
COL9A3-211ENST00000477612 POLNQ7Z5Q5 900 aa22.05■■□□□ 1.12
COL9A3-211ENST00000477612 ABI3BPQ7Z7G0 1075 aa22.05■■□□□ 1.12
COL9A3-211ENST00000477612 KLK6Q92876 244 aa22.05■■□□□ 1.12
COL9A3-211ENST00000477612 KLHDC7BQ96G42 594 aa22.05■■□□□ 1.12
COL9A3-211ENST00000477612 CELF6Q96J87 481 aaKnown RBP22.05■■□□□ 1.12
COL9A3-211ENST00000477612 LENG8Q96PV6 779 aaPredicted RBP22.05■■□□□ 1.12
COL9A3-211ENST00000477612 ANAPC7Q9UJX3 599 aa22.05■■□□□ 1.12
COL9A3-211ENST00000477612 APOBEC2Q9Y235 224 aaKnown RBP22.05■■□□□ 1.12
COL9A3-211ENST00000477612 NEUROG3Q9Y4Z2 214 aa22.05■■□□□ 1.12
COL9A3-211ENST00000477612 MAP1BP46821 2468 aaKnown RBP22.04■■□□□ 1.12
COL9A3-211ENST00000477612 CEP295Q9C0D2 2601 aa22.04■■□□□ 1.12
COL9A3-211ENST00000477612 SSU72P8A0A1W2PR75 194 aa22.04■■□□□ 1.12
COL9A3-211ENST00000477612 AREL1O15033 823 aa22.04■■□□□ 1.12
COL9A3-211ENST00000477612 SPINT1O43278 529 aa22.04■■□□□ 1.12
COL9A3-211ENST00000477612 RARAP10276 462 aa22.04■■□□□ 1.12
COL9A3-211ENST00000477612 PRLRP16471 622 aa22.04■■□□□ 1.12
COL9A3-211ENST00000477612 EPHA8P29322 1005 aaPredicted RBP22.04■■□□□ 1.12
COL9A3-211ENST00000477612 CSNK1DP48730 415 aa22.04■■□□□ 1.12
COL9A3-211ENST00000477612 SLC25A11Q02978 314 aaKnown RBP22.04■■□□□ 1.12
COL9A3-211ENST00000477612 FGL2Q14314 439 aa22.04■■□□□ 1.12
COL9A3-211ENST00000477612 GRM3Q14832 879 aa22.04■■□□□ 1.12
COL9A3-211ENST00000477612 SLC18A3Q16572 532 aa22.04■■□□□ 1.12
COL9A3-211ENST00000477612 INAVAQ3KP66 663 aa22.04■■□□□ 1.12
COL9A3-211ENST00000477612 SLCO6A1Q86UG4 719 aa22.04■■□□□ 1.12
COL9A3-211ENST00000477612 VSTM4Q8IW00 320 aa22.04■■□□□ 1.12
COL9A3-211ENST00000477612 NPWQ8N729 165 aa22.04■■□□□ 1.12
COL9A3-211ENST00000477612 C1QTNF2Q9BXJ5 285 aa22.04■■□□□ 1.12
COL9A3-211ENST00000477612 TMEM121BQ9BXQ6 578 aaPredicted RBP22.04■■□□□ 1.12
COL9A3-211ENST00000477612 CA5BQ9Y2D0 317 aa22.04■■□□□ 1.12
COL9A3-211ENST00000477612 SHROOM3Q8TF72 1996 aa22.04■■□□□ 1.12
COL9A3-211ENST00000477612 H3BRJ5 948 aa22.03■■□□□ 1.12
COL9A3-211ENST00000477612 MYO1FO00160 1098 aa22.03■■□□□ 1.12
COL9A3-211ENST00000477612 HYAL3O43820 417 aaPredicted RBP22.03■■□□□ 1.12
COL9A3-211ENST00000477612 THEGLP0DJG4 465 aa22.03■■□□□ 1.12
COL9A3-211ENST00000477612 SUOXP51687 545 aa22.03■■□□□ 1.12
COL9A3-211ENST00000477612 IL9RQ01113 521 aa22.03■■□□□ 1.12
COL9A3-211ENST00000477612 IL10RBQ08334 325 aa22.03■■□□□ 1.12
COL9A3-211ENST00000477612 RFTN1Q14699 578 aaPredicted RBP22.03■■□□□ 1.12
COL9A3-211ENST00000477612 TXNRD3NBQ6F5E7 133 aa22.03■■□□□ 1.12
COL9A3-211ENST00000477612 GCNT7Q6ZNI0 430 aa22.03■■□□□ 1.12
COL9A3-211ENST00000477612 KANSL1Q7Z3B3 1105 aa22.03■■□□□ 1.12
COL9A3-211ENST00000477612 NETO2Q8NC67 525 aa22.03■■□□□ 1.12
COL9A3-211ENST00000477612 FAM71BQ8TC56 605 aa22.03■■□□□ 1.12
COL9A3-211ENST00000477612 BTBD6Q96KE9 485 aa22.03■■□□□ 1.12
COL9A3-211ENST00000477612 BMFQ96LC9 184 aa22.03■■□□□ 1.12
COL9A3-211ENST00000477612 GPR27Q9NS67 375 aa22.03■■□□□ 1.12
COL9A3-211ENST00000477612 MSRB2Q9Y3D2 182 aa22.03■■□□□ 1.12
COL9A3-211ENST00000477612 TSPAN11A1L157 253 aa22.02■■□□□ 1.12
COL9A3-211ENST00000477612 INSIG1O15503 277 aa22.02■■□□□ 1.12
COL9A3-211ENST00000477612 TNFSF14O43557 240 aa22.02■■□□□ 1.12
COL9A3-211ENST00000477612 PAK4O96013 591 aaPredicted RBP22.02■■□□□ 1.12
COL9A3-211ENST00000477612 ITGAVP06756 1048 aa22.02■■□□□ 1.12
COL9A3-211ENST00000477612 SPINK2P20155 84 aa22.02■■□□□ 1.12
COL9A3-211ENST00000477612 ARL4AP40617 200 aa22.02■■□□□ 1.12
COL9A3-211ENST00000477612 NSUN2Q08J23 767 aaKnown RBP eCLIP22.02■■□□□ 1.12
COL9A3-211ENST00000477612 BNIP3Q12983 259 aa22.02■■□□□ 1.12
COL9A3-211ENST00000477612 SMTNL2Q2TAL5 461 aa22.02■■□□□ 1.12
COL9A3-211ENST00000477612 TTC7BQ86TV6 843 aa22.02■■□□□ 1.12
COL9A3-211ENST00000477612 GATAD2AQ86YP4 633 aa22.02■■□□□ 1.12
COL9A3-211ENST00000477612 DCP2Q8IU60 420 aaKnown RBP22.02■■□□□ 1.12
COL9A3-211ENST00000477612 CHCHD4Q8N4Q1 142 aa22.02■■□□□ 1.12
COL9A3-211ENST00000477612 TSC1Q92574 1164 aa22.02■■□□□ 1.12
COL9A3-211ENST00000477612 KLF6Q99612 283 aaPredicted RBP22.02■■□□□ 1.12
COL9A3-211ENST00000477612 UVRAGQ9P2Y5 699 aa22.02■■□□□ 1.12
COL9A3-211ENST00000477612 FRYQ5TBA9 3013 aa22.02■■□□□ 1.12
COL9A3-211ENST00000477612 AKAP13Q12802 2813 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms