RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 RWDD4Q6NW29 188 aaKnown RBP6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 IGF2-ASQ6U949 168 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 OLFML1Q6UWY5 402 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 ATG14Q6ZNE5 492 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 B3GNT8Q7Z7M8 397 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 CLEC14AQ86T13 490 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 SETD3Q86TU7 594 aaPredicted RBP6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 VASH2Q86V25 355 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 HID1Q8IV36 788 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 FMR1NBQ8N0W7 255 aaPredicted RBP6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 SDR16C5Q8N3Y7 309 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 PCDH20Q8N6Y1 951 aaKnown RBP6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 PAF1Q8N7H5 531 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 Q8N9G6 341 aaPredicted RBP6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 EXD3Q8N9H8 876 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 ZSCAN1Q8NBB4 408 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 KYQ8NBH2 561 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 PCDH19Q8TAB3 1148 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 WDR48Q8TAF3 677 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 CXorf40AQ8TE69 158 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 SNRNP27Q8WVK2 155 aaKnown RBP6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 SGF29Q96ES7 293 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 KLHL32Q96NJ5 620 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 WRAP53Q9BUR4 548 aaKnown RBP6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 C1QTNF7Q9BXJ2 289 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 CEP44Q9C0F1 390 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 ANLNQ9NQW6 1124 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 ASNSD1Q9NWL6 643 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 ATXN7L1Q9ULK2 861 aaPredicted RBP6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 ZDHHC9Q9Y397 364 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 PCDHB11Q9Y5F2 797 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 ACTL7AQ9Y615 435 aa6.79□□□□□ -1.32
RTFDC1-206ENST00000477485 DOPEY2Q9Y3R5 2298 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 D6RAR5 112 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 LMO7DNF2Z398 122 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 TPP1O14773 563 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 PMM2O15305 246 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 EFSO43281 561 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 AP1G1O43747 822 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 MMP20O60882 483 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 TM7SF2O76062 418 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 GNA14O95837 355 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 LIPCP11150 499 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 TSHRP16473 764 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 ITIH1P19827 911 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 UGT1A5P35504 534 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 IGFALSP35858 605 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 EIF4A3P38919 411 aaKnown RBP6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 PPP1R2P41236 205 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 MLLT3P42568 568 aaPredicted RBP6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 PPM1FP49593 454 aaPredicted RBP6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 CXCR3P49682 368 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 BLKP51451 505 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 PDX1P52945 283 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 SNRPD1P62314 119 aaKnown RBP6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 CYP4F2P78329 520 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 CCL7P80098 99 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 ARF5P84085 180 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 GNA12Q03113 381 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 PTK2Q05397 1052 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 PAK1Q13153 545 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 EIF4EBP2Q13542 120 aaPredicted RBP6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 ELOCQ15369 112 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 KLHL40Q2TBA0 621 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 ARL13BQ3SXY8 428 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 ZNF805Q5CZA5 627 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 ATXN7L2Q5T6C5 722 aaPredicted RBP6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 PHF19Q5T6S3 580 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 TTI2Q6NXR4 508 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 TRIM65Q6PJ69 517 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 ENPP7Q6UWV6 458 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 MACC1Q6ZN28 852 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 ENOSF1Q7L5Y1 443 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 SLC26A9Q7LBE3 791 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 TTC7BQ86TV6 843 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 FAM131BQ86XD5 332 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 TRIM59Q8IWR1 403 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 WDTC1Q8N5D0 677 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 ARL10Q8N8L6 244 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 DENND6BQ8NEG7 585 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 JPH3Q8WXH2 748 aaPredicted RBP6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 TSACCQ96A04 125 aaPredicted RBP6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 RAB7BQ96AH8 199 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 ARHGEF26Q96DR7 871 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 LIN37Q96GY3 246 aaPredicted RBP6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 TMEM74Q96NL1 305 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 TBCBQ99426 244 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 KLF6Q99612 283 aaPredicted RBP6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 EPAS1Q99814 870 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 NCAPGQ9BPX3 1015 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 BOCQ9BWV1 1114 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 SRRTQ9BXP5 876 aaKnown RBP6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 ZYG11BQ9C0D3 744 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 ZMYND15Q9H091 742 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 GPR27Q9NS67 375 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 ARHGEF38Q9NXL2 777 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 DNAI1Q9UI46 699 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 MAN1B1Q9UKM7 699 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 HPCAL4Q9UM19 191 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms