RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 TRAF2Q12933 501 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 FZD5Q13467 585 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 ENPP2Q13822 863 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 CCINQ13939 588 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 EIF4HQ15056 248 aaKnown RBP9.4□□□□□ -0.9
PGK1-204ENST00000477335 FAM153CQ494X1 144 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 FNDC3BQ53EP0 1204 aaKnown RBP9.4□□□□□ -0.9
PGK1-204ENST00000477335 C9orf64Q5T6V5 341 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 ITPRIPL1Q6GPH6 555 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 DENND5AQ6IQ26 1287 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 Q6ZS52 159 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 MICALCLQ6ZW33 695 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 SRLQ86TD4 932 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 ZSWIM9Q86XI8 627 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 GJD3Q8N144 294 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 PCDH20Q8N6Y1 951 aaKnown RBP9.4□□□□□ -0.9
PGK1-204ENST00000477335 OR2AP1Q8NGE2 309 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 FBXO25Q8TCJ0 367 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 NSMCE1Q8WV22 266 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 FAM3CQ92520 227 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 ART4Q93070 314 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 ISG20Q96AZ6 181 aaKnown RBP9.4□□□□□ -0.9
PGK1-204ENST00000477335 TRIB3Q96RU7 358 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 PARD6BQ9BYG5 372 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 POLR1EQ9GZS1 481 aaKnown RBP9.4□□□□□ -0.9
PGK1-204ENST00000477335 RAB17Q9H0T7 212 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 CD248Q9HCU0 757 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 ARHGEF3Q9NR81 526 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 PIH1D1Q9NWS0 290 aaKnown RBP9.4□□□□□ -0.9
PGK1-204ENST00000477335 C2orf42Q9NWW7 574 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 WHRNQ9P202 907 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 FAM153AQ9UHL3 310 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 TPX2Q9ULW0 747 aaKnown RBP9.4□□□□□ -0.9
PGK1-204ENST00000477335 NDRG2Q9UN36 371 aaKnown RBP9.4□□□□□ -0.9
PGK1-204ENST00000477335 UTP11Q9Y3A2 253 aaKnown RBP9.4□□□□□ -0.9
PGK1-204ENST00000477335 STON1Q9Y6Q2 735 aa9.4□□□□□ -0.9
PGK1-204ENST00000477335 F5P12259 2224 aa9.4□□□□□ -0.91
PGK1-204ENST00000477335 TRAFD1O14545 582 aaPredicted RBP9.39□□□□□ -0.91
PGK1-204ENST00000477335 BNIP3LO60238 219 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 SIN3BO75182 1162 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 AVILO75366 819 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 ZNF189O75820 626 aaPredicted RBP9.39□□□□□ -0.91
PGK1-204ENST00000477335 SUN1O94901 812 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 AP2A1O95782 977 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 APRTP07741 180 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 ATXN1LP0C7T5 689 aaKnown RBP9.39□□□□□ -0.91
PGK1-204ENST00000477335 CHRNB1P11230 501 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 TPSB2P20231 275 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 TNFRSF8P28908 595 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 HSPA9P38646 679 aaKnown RBP9.39□□□□□ -0.91
PGK1-204ENST00000477335 CCNHP51946 323 aaPredicted RBP9.39□□□□□ -0.91
PGK1-204ENST00000477335 PLTPP55058 493 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 GEMIN4P57678 1058 aaKnown RBP9.39□□□□□ -0.91
PGK1-204ENST00000477335 NSUN2Q08J23 767 aaKnown RBP eCLIP9.39□□□□□ -0.91
PGK1-204ENST00000477335 TPSAB1Q15661 275 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 PCSK7Q16549 785 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 MYLK3Q32MK0 819 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 HNRNPA1L2Q32P51 320 aaKnown RBP9.39□□□□□ -0.91
PGK1-204ENST00000477335 ACCSLQ4AC99 568 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 MSS51Q4VC12 460 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 C2orf27AQ580R0 203 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 CARD16Q5EG05 197 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 FNBP1LQ5T0N5 605 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 KIAA1211LQ6NV74 962 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 CCNI2Q6ZMN8 369 aaPredicted RBP9.39□□□□□ -0.91
PGK1-204ENST00000477335 KDELC2Q7Z4H8 507 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 CAND1Q86VP6 1230 aaKnown RBP9.39□□□□□ -0.91
PGK1-204ENST00000477335 SUGP1Q8IWZ8 645 aaKnown RBP9.39□□□□□ -0.91
PGK1-204ENST00000477335 PPIL6Q8IXY8 311 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 STK40Q8N2I9 435 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 MPP5Q8N3R9 675 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 GPR161Q8N6U8 529 aaKnown RBP9.39□□□□□ -0.91
PGK1-204ENST00000477335 IL17RCQ8NAC3 791 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 IPMKQ8NFU5 416 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 CCHCR1Q8TD31 782 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 IFT81Q8WYA0 676 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 LRRC45Q96CN5 670 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 FAM129BQ96TA1 746 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 FERMT1Q9BQL6 677 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 FICDQ9BVA6 458 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 FOXQ1Q9C009 403 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 EIF2B3Q9NR50 452 aaKnown RBP9.39□□□□□ -0.91
PGK1-204ENST00000477335 HECAQ9UBI9 543 aaPredicted RBP9.39□□□□□ -0.91
PGK1-204ENST00000477335 ANAPC5Q9UJX4 755 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 SARDHQ9UL12 918 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 RAB21Q9UL25 225 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 NFU1Q9UMS0 254 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 PCDHGC4Q9Y5F7 938 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 WASF2Q9Y6W5 498 aa9.39□□□□□ -0.91
PGK1-204ENST00000477335 A0A0U1RQS6 177 aa9.38□□□□□ -0.91
PGK1-204ENST00000477335 LOC285095A0A1B0GVY8 99 aa9.38□□□□□ -0.91
PGK1-204ENST00000477335 A0A1W2PQF6 199 aa9.38□□□□□ -0.91
PGK1-204ENST00000477335 FZD6O60353 706 aa9.38□□□□□ -0.91
PGK1-204ENST00000477335 RNF40O75150 1001 aa9.38□□□□□ -0.91
PGK1-204ENST00000477335 NEBLO76041 1014 aa9.38□□□□□ -0.91
PGK1-204ENST00000477335 KLF8O95600 359 aaPredicted RBP9.38□□□□□ -0.91
PGK1-204ENST00000477335 IGSF6O95976 241 aa9.38□□□□□ -0.91
PGK1-204ENST00000477335 PRKCGP05129 697 aa9.38□□□□□ -0.91
PGK1-204ENST00000477335 PDHA1P08559 390 aa9.38□□□□□ -0.91
PGK1-204ENST00000477335 ITIH2P19823 946 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms