RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 RENBPP51606 427 aa16.07■□□□□ 0.16
COPS3-207ENST00000477299 SEMG2Q02383 582 aa16.07■□□□□ 0.16
COPS3-207ENST00000477299 NSUN2Q08J23 767 aaKnown RBP eCLIP16.07■□□□□ 0.16
COPS3-207ENST00000477299 PTPRRQ15256 657 aa16.07■□□□□ 0.16
COPS3-207ENST00000477299 ZNF528Q3MIS6 628 aa16.07■□□□□ 0.16
COPS3-207ENST00000477299 TEX44Q53QW1 395 aa16.07■□□□□ 0.16
COPS3-207ENST00000477299 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.07■□□□□ 0.16
COPS3-207ENST00000477299 BZW1Q7L1Q6 419 aaKnown RBP16.07■□□□□ 0.16
COPS3-207ENST00000477299 HDDC3Q8N4P3 179 aa16.07■□□□□ 0.16
COPS3-207ENST00000477299 PRELID2Q8N945 189 aa16.07■□□□□ 0.16
COPS3-207ENST00000477299 ZBTB44Q8NCP5 570 aa16.07■□□□□ 0.16
COPS3-207ENST00000477299 TMIEQ8NEW7 156 aa16.07■□□□□ 0.16
COPS3-207ENST00000477299 CAPZA3Q96KX2 299 aa16.07■□□□□ 0.16
COPS3-207ENST00000477299 SMIM14Q96QK8 99 aa16.07■□□□□ 0.16
COPS3-207ENST00000477299 TMEM121Q9BTD3 319 aa16.07■□□□□ 0.16
COPS3-207ENST00000477299 ZSCAN32Q9NX65 697 aa16.07■□□□□ 0.16
COPS3-207ENST00000477299 FBXL12Q9NXK8 326 aa16.07■□□□□ 0.16
COPS3-207ENST00000477299 USP36Q9P275 1121 aaKnown RBP16.07■□□□□ 0.16
COPS3-207ENST00000477299 TNRC6BQ9UPQ9 1833 aaKnown RBP16.07■□□□□ 0.16
COPS3-207ENST00000477299 TRPM6Q9BX84 2022 aa16.07■□□□□ 0.16
COPS3-207ENST00000477299 CACNA1HO95180 2353 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 IGHV1OR15-9A0A0B4J2B8 117 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 BCLAF3A2AJT9 711 aaKnown RBP16.06■□□□□ 0.16
COPS3-207ENST00000477299 CTAGE9A4FU28 777 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 HACD1B0YJ81 288 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 ALOX15BO15296 676 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 KCNN4O15554 427 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 LIASO43766 372 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 RNASEH1O60930 286 aaKnown RBP16.06■□□□□ 0.16
COPS3-207ENST00000477299 RNASEH2AO75792 299 aaKnown RBP16.06■□□□□ 0.16
COPS3-207ENST00000477299 DNTTP04053 509 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 ETS1P14921 441 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 MSNP26038 577 aaKnown RBP16.06■□□□□ 0.16
COPS3-207ENST00000477299 ACSL1P33121 698 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 P2RY2P41231 377 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 CSNK1DP48730 415 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 NUBP1P53384 320 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 ZNF33AQ06730 810 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 TRAF2Q12933 501 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 OASLQ15646 514 aaKnown RBP16.06■□□□□ 0.16
COPS3-207ENST00000477299 GDPD4Q6W3E5 623 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 PARS2Q7L3T8 475 aaKnown RBP16.06■□□□□ 0.16
COPS3-207ENST00000477299 METTL3Q86U44 580 aaKnown RBP16.06■□□□□ 0.16
COPS3-207ENST00000477299 PRPF39Q86UA1 669 aaKnown RBP16.06■□□□□ 0.16
COPS3-207ENST00000477299 CREG2Q8IUH2 290 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 FAM71DQ8N9W8 422 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 GLIS1Q8NBF1 620 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 SPATA22Q8NHS9 363 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 GANCQ8TET4 914 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 TEKT5Q96M29 485 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 CCDC114Q96M63 670 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 NUDCD1Q96RS6 583 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 CPEB1Q9BZB8 566 aaKnown RBP16.06■□□□□ 0.16
COPS3-207ENST00000477299 BRD8Q9H0E9 1235 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 SCUBE2Q9NQ36 999 aa16.06■□□□□ 0.16
COPS3-207ENST00000477299 FARP1Q9Y4F1 1045 aaPredicted RBP16.06■□□□□ 0.16
COPS3-207ENST00000477299 C16orf96A6NNT2 1141 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 ADH1BP00325 375 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 PRNPP04156 253 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 PDHA1P08559 390 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 ACADMP11310 421 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 TIMP2P16035 220 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 NFKB1P19838 968 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 C5AR1P21730 350 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 CASQ1P31415 396 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 TAS2R38P59533 333 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 PIP5KL1Q5T9C9 394 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 ALG1LQ6GMV1 187 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 TTC27Q6P3X3 843 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 CDKL3Q8IVW4 592 aaPredicted RBP16.05■□□□□ 0.16
COPS3-207ENST00000477299 TAB3Q8N5C8 712 aaPredicted RBP16.05■□□□□ 0.16
COPS3-207ENST00000477299 TTC13Q8NBP0 860 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 CCDC110Q8TBZ0 833 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 TOE1Q96GM8 510 aaKnown RBP16.05■□□□□ 0.16
COPS3-207ENST00000477299 RBM15Q96T37 977 aaKnown RBP eCLIP16.05■□□□□ 0.16
COPS3-207ENST00000477299 OMDQ99983 421 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 GORASP1Q9BQQ3 440 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 SUV39H2Q9H5I1 410 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 FBRSQ9HAH7 460 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 GLOD4Q9HC38 313 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 UBP1Q9NZI7 540 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 GGT7Q9UJ14 662 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 TTC7AQ9ULT0 858 aaPredicted RBP16.05■□□□□ 0.16
COPS3-207ENST00000477299 PLXNA2O75051 1894 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 MUC6Q6W4X9 2439 aa16.05■□□□□ 0.16
COPS3-207ENST00000477299 CCDC163A0A0D9SF12 145 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 A0A0U1RQS6 177 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 TRAFD1O14545 582 aaPredicted RBP16.04■□□□□ 0.16
COPS3-207ENST00000477299 SPINT1O43278 529 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 LILRB5O75023 590 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 MT-CYBP00156 380 aaPredicted RBP16.04■□□□□ 0.16
COPS3-207ENST00000477299 CD86P42081 329 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 ABL2P42684 1182 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 SKOR1P84550 965 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 BYSLQ13895 437 aaKnown RBP16.04■□□□□ 0.16
COPS3-207ENST00000477299 CCNG2Q16589 344 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 LPAL2Q16609 132 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 ZNF805Q5CZA5 627 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 ANKRD20A2Q5SQ80 823 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 ANKRD20A1Q5TYW2 823 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms