RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 FGD3Q5JSP0 725 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 GLRA4Q5JXX5 417 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 C17orf99Q6UX52 265 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 TMEM26Q6ZUK4 368 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 URGCPQ8TCY9 931 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 AGR3Q8TD06 166 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 ANKRD36BP1Q96IX9 119 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 FAR2Q96K12 515 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 SPATA33Q96N06 139 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 IGKV6D-21A0A0A0MT36 114 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 E7ENX8 843 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 OGTO15294 1046 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 DYNC1LI2O43237 492 aaPredicted RBP15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 AQP9O43315 295 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 CLPXO76031 633 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 CD1EP15812 388 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 JUNBP17275 347 aaPredicted RBP15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 MAP4P27816 1152 aaKnown RBP15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 TM4SF4P48230 202 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 STAT5BP51692 787 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 BNIP3Q12983 259 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 LRP8Q14114 963 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 CLPPQ16740 277 aaPredicted RBP15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 ARL13AQ5H913 290 aaPredicted RBP15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 ZNF667Q5HYK9 610 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 REP15Q6BDI9 236 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 FAM117BQ6P1L5 589 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 LINC00299Q6ZSB3 139 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 DHFR2Q86XF0 187 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 PELI3Q8N2H9 469 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 AFAP1L2Q8N4X5 818 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 FAM156AQ8NDB6 213 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 RAB2BQ8WUD1 216 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 AFG1LQ8WV93 481 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 NRBF2Q96F24 287 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 GPN2Q9H9Y4 310 aaPredicted RBP15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 MRM3Q9HC36 420 aaKnown RBP15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 PDGFCQ9NRA1 345 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 CACNA2D2Q9NY47 1150 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 CROTQ9UKG9 612 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 ZNF236Q9UL36 1845 aa15.42■□□□□ 0.06
CLSTN1-205ENST00000477264 AQP12BA6NM10 295 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 NPHS1O60500 1241 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 GPD2P43304 727 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 SESN2P58004 480 aaPredicted RBP15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 ITGA7Q13683 1181 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 INPP5AQ14642 412 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 ZNF846Q147U1 533 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 OXA1LQ15070 435 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 DPYSL2Q16555 572 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 C15orf59Q2T9L4 293 aaPredicted RBP15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 HSDL1Q3SXM5 330 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 SLC2A7Q6PXP3 512 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 KCNT2Q6UVM3 1135 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 AQP12AQ8IXF9 295 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 TTC30BQ8N4P2 665 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 HTR3CQ8WXA8 447 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 TANKQ92844 425 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 TAMM41Q96BW9 452 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 MAGED4Q96JG8 741 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 SLC45A3Q96JT2 553 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 TINF2Q9BSI4 451 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 TUT1Q9H6E5 874 aaKnown RBP15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 LRRC40Q9H9A6 602 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 NRBP2Q9NSY0 501 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 SYBUQ9NX95 663 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 PKD2L2Q9NZM6 624 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 GTF2IRD1Q9UHL9 959 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 MGAMO43451 1857 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 LTFP02788 710 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 VDRP11473 427 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 FCGR1AP12314 374 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 HLCSP50747 726 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 CRHR2Q13324 411 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 ATP6AP1Q15904 470 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 CDO1Q16878 200 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 C6orf10Q5SRN2 563 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 SH3PXD2AQ5TCZ1 1133 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 TMEM198Q66K66 360 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 FSTL4Q6MZW2 842 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 TRNP1Q6NT89 227 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 NEPROQ6NW34 567 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 STRA8Q7Z7C7 330 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 SLC15A4Q8N697 577 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 OR13F1Q8NGS4 319 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 CXorf38Q8TB03 319 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 ZNF347Q96SE7 839 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 GPR20Q99678 358 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 WDR12Q9GZL7 423 aaKnown RBP15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 FAM124BQ9H5Z6 455 aaPredicted RBP15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 LRRC4Q9HBW1 653 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 CCM2LQ9NUG4 571 aaPredicted RBP15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 NSMCE4AQ9NXX6 385 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 TMEM181Q9P2C4 612 aa15.41■□□□□ 0.06
CLSTN1-205ENST00000477264 KCNU1A8MYU2 1149 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 KDM1AO60341 852 aa15.4■□□□□ 0.06
CLSTN1-205ENST00000477264 C2P06681 752 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms