RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 RPL14P50914 215 aaKnown RBP16.64■□□□□ 0.25
TMEM53-208ENST00000476724 KPNA2P52292 529 aaKnown RBP16.64■□□□□ 0.25
TMEM53-208ENST00000476724 RAB10P61026 200 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 SLC25A3Q00325 362 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 PRKAA1Q13131 559 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 POU6F1Q14863 301 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 VARS2Q5ST30 1063 aaKnown RBP16.64■□□□□ 0.25
TMEM53-208ENST00000476724 ARTNQ5T4W7 220 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 VWA5B1Q5TIE3 1220 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 C1orf53Q5VUE5 145 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 KIAA0930Q6ICG6 404 aaPredicted RBP16.64■□□□□ 0.25
TMEM53-208ENST00000476724 PGM2L1Q6PCE3 622 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 FBXO46Q6PJ61 603 aaPredicted RBP16.64■□□□□ 0.25
TMEM53-208ENST00000476724 ARHGAP18Q8N392 663 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 PDCD6IPQ8WUM4 868 aaKnown RBP16.64■□□□□ 0.25
TMEM53-208ENST00000476724 CLPTM1LQ96KA5 538 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 SCYL1Q96KG9 808 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 FAM167BQ9BTA0 163 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 TCF7L2Q9NQB0 619 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 CPSF2Q9P2I0 782 aaKnown RBP16.64■□□□□ 0.25
TMEM53-208ENST00000476724 TLR6Q9Y2C9 796 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 SLC22A2O15244 555 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 HLA-DQB2P05538 268 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 ANPEPP15144 967 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 GLDCP23378 1020 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 ADSLP30566 484 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-208ENST00000476724 ABL2P42684 1182 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 BTKQ06187 659 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 FAM171A1Q5VUB5 890 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 ANO7Q6IWH7 933 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 ESRP1Q6NXG1 681 aaKnown RBP16.63■□□□□ 0.25
TMEM53-208ENST00000476724 MSANTD2Q6P1R3 559 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 KIAA0408Q6ZU52 694 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 ADGRG6Q86SQ4 1221 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 DNAJC5GQ8N7S2 189 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 FUBP3Q96I24 572 aaKnown RBP eCLIP16.63■□□□□ 0.25
TMEM53-208ENST00000476724 PAWRQ96IZ0 340 aaKnown RBP16.63■□□□□ 0.25
TMEM53-208ENST00000476724 ZCWPW1Q9H0M4 648 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 FBXO44Q9H4M3 255 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 ARNT2Q9HBZ2 717 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 TREX1Q9NSU2 369 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 CORO1CQ9ULV4 474 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-208ENST00000476724 ARHGAP26Q9UNA1 814 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 SCML2Q9UQR0 700 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 HS3ST4Q9Y661 456 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 A0A087X1B8 175 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 FAM95CA0A1B0GW59 222 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 TARM1B6A8C7 271 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 MSI1O43347 362 aaKnown RBP16.63■□□□□ 0.25
TMEM53-208ENST00000476724 ALDH2P05091 517 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 ITGB8P26012 769 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 GRIA4P48058 902 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 PSEN1P49768 467 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 PAPOLAP51003 745 aaKnown RBP16.63■□□□□ 0.25
TMEM53-208ENST00000476724 NDST2P52849 883 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 KLC1Q07866 573 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 KLF10Q13118 480 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 HNRNPDQ14103 355 aaKnown RBP16.63■□□□□ 0.25
TMEM53-208ENST00000476724 LRRC26Q2I0M4 334 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 SEL1L3Q68CR1 1132 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 LRRC8EQ6NSJ5 796 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 IRGCQ6NXR0 463 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 FSTL5Q8N475 847 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-208ENST00000476724 POU5F2Q8N7G0 328 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 C2CD4AQ8NCU7 369 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-208ENST00000476724 BCL7CQ8WUZ0 217 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-208ENST00000476724 JADE3Q92613 823 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 MRGPRX2Q96LB1 330 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 RTKNQ9BST9 563 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 OXCT2Q9BYC2 517 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-208ENST00000476724 SLC25A51Q9H1U9 297 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 TMEM39AQ9NV64 488 aa16.63■□□□□ 0.25
TMEM53-208ENST00000476724 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-208ENST00000476724 IPO11Q9UI26 975 aaKnown RBP16.63■□□□□ 0.25
TMEM53-208ENST00000476724 KIAA0100Q14667 2235 aaKnown RBP16.63■□□□□ 0.25
TMEM53-208ENST00000476724 MYO16Q9Y6X6 1858 aa16.62■□□□□ 0.25
TMEM53-208ENST00000476724 A0A1W2PQH9 124 aa16.62■□□□□ 0.25
TMEM53-208ENST00000476724 MEI4A8MW99 385 aa16.62■□□□□ 0.25
TMEM53-208ENST00000476724 TK2O00142 265 aa16.62■□□□□ 0.25
TMEM53-208ENST00000476724 PHGDHO43175 533 aaKnown RBP16.62■□□□□ 0.25
TMEM53-208ENST00000476724 DCXO43602 365 aa16.62■□□□□ 0.25
TMEM53-208ENST00000476724 SMNDC1O75940 238 aaKnown RBP eCLIP16.62■□□□□ 0.25
TMEM53-208ENST00000476724 F7P08709 466 aaPredicted RBP16.62■□□□□ 0.25
TMEM53-208ENST00000476724 SBK3P0C264 359 aa16.62■□□□□ 0.25
TMEM53-208ENST00000476724 HSPA8P11142 646 aaKnown RBP16.62■□□□□ 0.25
TMEM53-208ENST00000476724 COX4I1P13073 169 aa16.62■□□□□ 0.25
TMEM53-208ENST00000476724 GJA8P48165 433 aa16.62■□□□□ 0.25
TMEM53-208ENST00000476724 RENBPP51606 427 aa16.62■□□□□ 0.25
TMEM53-208ENST00000476724 POU4F1Q01851 419 aa16.62■□□□□ 0.25
TMEM53-208ENST00000476724 NFE2Q16621 373 aaPredicted RBP16.62■□□□□ 0.25
TMEM53-208ENST00000476724 SLC9B1Q4ZJI4 515 aa16.62■□□□□ 0.25
TMEM53-208ENST00000476724 SCN4BQ8IWT1 228 aa16.62■□□□□ 0.25
TMEM53-208ENST00000476724 NUP93Q8N1F7 819 aa16.62■□□□□ 0.25
TMEM53-208ENST00000476724 UMODL1-AS1Q8N2C9 162 aa16.62■□□□□ 0.25
TMEM53-208ENST00000476724 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.62■□□□□ 0.25
TMEM53-208ENST00000476724 CALML6Q8TD86 181 aa16.62■□□□□ 0.25
TMEM53-208ENST00000476724 KCTD4Q8WVF5 259 aa16.62■□□□□ 0.25
TMEM53-208ENST00000476724 CNDP1Q96KN2 507 aa16.62■□□□□ 0.25
TMEM53-208ENST00000476724 C8orf48Q96LL4 319 aa16.62■□□□□ 0.25
TMEM53-208ENST00000476724 NMUR1Q9HB89 426 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms