RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 DUSP12Q9UNI6 340 aa7.11□□□□□ -1.27
LRCH3-215ENST00000476664 PTRH2Q9Y3E5 179 aaKnown RBP7.11□□□□□ -1.27
LRCH3-215ENST00000476664 LOC100509620A0A075B734 347 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 LRRD1A4D1F6 860 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 EIF3CLB5ME19 914 aaKnown RBP7.1□□□□□ -1.27
LRCH3-215ENST00000476664 ZNF263O14978 683 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 PGRMC2O15173 223 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 PRPF4O43172 522 aaKnown RBP eCLIP7.1□□□□□ -1.27
LRCH3-215ENST00000476664 PRPSAP2O60256 369 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 RECQL5O94762 991 aaPredicted RBP7.1□□□□□ -1.27
LRCH3-215ENST00000476664 WDR47O94967 919 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 PRR35P0CG20 571 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 IL10P22301 178 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 CD6P30203 668 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 UQCRC1P31930 480 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 HTR7P34969 479 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 IL13P35225 146 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 NF2P35240 595 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 GCLCP48506 637 aaPredicted RBP7.1□□□□□ -1.27
LRCH3-215ENST00000476664 MFAP4P55083 255 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 FAM3BP58499 235 aaPredicted RBP7.1□□□□□ -1.27
LRCH3-215ENST00000476664 BPIFB4P59827 614 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 ALCAMQ13740 583 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 PTK6Q13882 451 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 GSTA3Q16772 222 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 TIGD5Q53EQ6 642 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 MPP7Q5T2T1 576 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 MTHFD1LQ6UB35 978 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 ZNF574Q6ZN55 896 aaPredicted RBP7.1□□□□□ -1.27
LRCH3-215ENST00000476664 MSANTD1Q6ZTZ1 278 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 ERN2Q76MJ5 926 aaKnown RBP7.1□□□□□ -1.27
LRCH3-215ENST00000476664 PARS2Q7L3T8 475 aaKnown RBP7.1□□□□□ -1.27
LRCH3-215ENST00000476664 SLC15A3Q8IY34 581 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 IL17RCQ8NAC3 791 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 SPATA20Q8TB22 786 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 DGAT2Q96PD7 388 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 CRAMP1Q96RY5 1269 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 PTDSS2Q9BVG9 487 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 STRA6Q9BX79 667 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 SLC6A15Q9H2J7 730 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 CXorf36Q9H7Y0 433 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 FBRSL1Q9HCM7 1045 aaKnown RBP7.1□□□□□ -1.27
LRCH3-215ENST00000476664 IL1RAPL2Q9NP60 686 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 MBNL1Q9NR56 388 aaKnown RBP7.1□□□□□ -1.27
LRCH3-215ENST00000476664 AKAP7Q9P0M2 348 aaPredicted RBP7.1□□□□□ -1.27
LRCH3-215ENST00000476664 AMACRQ9UHK6 382 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 OSGIN1Q9UJX0 560 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 CROTQ9UKG9 612 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 SLC27A6Q9Y2P4 619 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 UBR2Q8IWV8 1755 aa7.1□□□□□ -1.27
LRCH3-215ENST00000476664 ABCC12Q96J65 1359 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 CHD9Q3L8U1 2897 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 ZFHX2Q9C0A1 2572 aaPredicted RBP7.09□□□□□ -1.27
LRCH3-215ENST00000476664 TCRBV21S2A2A0A5A6 115 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 ABLIM1O14639 778 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 NKX2-8O15522 239 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 TPOP07202 933 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 ERCC2P18074 760 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 FSTP19883 344 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 DRD1P21728 446 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 TOB1P50616 345 aaPredicted RBP7.09□□□□□ -1.27
LRCH3-215ENST00000476664 ZNF134P52741 427 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 EPHB3P54753 998 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 ITGA1P56199 1179 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 RPL15P61313 204 aaKnown RBP7.09□□□□□ -1.27
LRCH3-215ENST00000476664 TIAL1Q01085 375 aaKnown RBP eCLIP7.09□□□□□ -1.27
LRCH3-215ENST00000476664 C17orf67Q0P5P2 114 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 RPA4Q13156 261 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 MRPL49Q13405 166 aaKnown RBP7.09□□□□□ -1.27
LRCH3-215ENST00000476664 CBFBQ13951 182 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 E2F2Q14209 437 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 PLEKHO1Q53GL0 409 aaPredicted RBP7.09□□□□□ -1.27
LRCH3-215ENST00000476664 ZNF385CQ66K41 422 aaPredicted RBP7.09□□□□□ -1.27
LRCH3-215ENST00000476664 TMEM81Q6P7N7 255 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 PRR23CQ6ZRP0 262 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 CFAP52Q8N1V2 620 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 PSD4Q8NDX1 1056 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 CADM4Q8NFZ8 388 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 RAET1EQ8TD07 263 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 ZFAND2BQ8WV99 257 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 CNOT9Q92600 299 aaKnown RBP7.09□□□□□ -1.27
LRCH3-215ENST00000476664 CLMNQ96JQ2 1002 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 C1orf74Q96LT6 269 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 ZSWIM3Q96MP5 696 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 DACH2Q96NX9 599 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 DEFB118Q96PH6 123 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 TRIB1Q96RU8 372 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.09□□□□□ -1.27
LRCH3-215ENST00000476664 CTDSP1Q9GZU7 261 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 ENKD1Q9H0I2 346 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 TLR8Q9NR97 1041 aaKnown RBP7.09□□□□□ -1.27
LRCH3-215ENST00000476664 THAP1Q9NVV9 213 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 NCDNQ9UBB6 729 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 STEAP1Q9UHE8 339 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 FZD1Q9UP38 647 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 MRPS17Q9Y2R5 130 aaKnown RBP7.09□□□□□ -1.27
LRCH3-215ENST00000476664 SNX14Q9Y5W7 946 aa7.09□□□□□ -1.27
LRCH3-215ENST00000476664 SCN9AQ15858 1988 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 MYO9BQ13459 2157 aa7.08□□□□□ -1.28
LRCH3-215ENST00000476664 DDX60LQ5H9U9 1706 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms