RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ACVR2BQ13705 512 aa6.27□□□□□ -1.41
VPS50-212ENST00000476413 DAZAP2Q15038 168 aaPredicted RBP6.27□□□□□ -1.41
VPS50-212ENST00000476413 CCNG2Q16589 344 aa6.27□□□□□ -1.41
VPS50-212ENST00000476413 ALG10Q5BKT4 473 aa6.27□□□□□ -1.41
VPS50-212ENST00000476413 ALG10BQ5I7T1 473 aa6.27□□□□□ -1.41
VPS50-212ENST00000476413 STRIP1Q5VSL9 837 aa6.27□□□□□ -1.41
VPS50-212ENST00000476413 MIS18BP1Q6P0N0 1132 aa6.27□□□□□ -1.41
VPS50-212ENST00000476413 FAM83HQ6ZRV2 1179 aaPredicted RBP6.27□□□□□ -1.41
VPS50-212ENST00000476413 PTF1AQ7RTS3 328 aa6.27□□□□□ -1.41
VPS50-212ENST00000476413 DHX40Q8IX18 779 aaKnown RBP6.27□□□□□ -1.41
VPS50-212ENST00000476413 SLC25A41Q8N5S1 370 aa6.27□□□□□ -1.41
VPS50-212ENST00000476413 FRMD1Q8N878 549 aa6.27□□□□□ -1.41
VPS50-212ENST00000476413 KDM1BQ8NB78 822 aa6.27□□□□□ -1.41
VPS50-212ENST00000476413 PSPC1Q8WXF1 523 aaKnown RBP6.27□□□□□ -1.41
VPS50-212ENST00000476413 MSI2Q96DH6 328 aaKnown RBP6.27□□□□□ -1.41
VPS50-212ENST00000476413 PABPC5Q96DU9 382 aaKnown RBP6.27□□□□□ -1.41
VPS50-212ENST00000476413 ZNF419Q96HQ0 510 aaPredicted RBP6.27□□□□□ -1.41
VPS50-212ENST00000476413 SIGLEC11Q96RL6 698 aa6.27□□□□□ -1.41
VPS50-212ENST00000476413 CCDC68Q9H2F9 335 aa6.27□□□□□ -1.41
VPS50-212ENST00000476413 RIOX1Q9H6W3 641 aa6.27□□□□□ -1.41
VPS50-212ENST00000476413 PRKRIP1Q9H875 184 aaPredicted RBP6.27□□□□□ -1.41
VPS50-212ENST00000476413 PNRC2Q9NPJ4 139 aaKnown RBP6.27□□□□□ -1.41
VPS50-212ENST00000476413 ADARB2Q9NS39 739 aaKnown RBP6.27□□□□□ -1.41
VPS50-212ENST00000476413 TMEM45AQ9NWC5 275 aa6.27□□□□□ -1.41
VPS50-212ENST00000476413 ABI3Q9P2A4 366 aa6.27□□□□□ -1.41
VPS50-212ENST00000476413 ADD3Q9UEY8 706 aaKnown RBP6.27□□□□□ -1.41
VPS50-212ENST00000476413 COX11Q9Y6N1 276 aa6.27□□□□□ -1.41
VPS50-212ENST00000476413 F8W810 466 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 PPP6CO00743 305 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 RBMXL2O75526 392 aaKnown RBP6.26□□□□□ -1.41
VPS50-212ENST00000476413 RARGP13631 454 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 PORP16435 677 aaPredicted RBP6.26□□□□□ -1.41
VPS50-212ENST00000476413 CDH2P19022 906 aaPredicted RBP6.26□□□□□ -1.41
VPS50-212ENST00000476413 TGFB2P61812 414 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 DUSP28Q4G0W2 176 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 PIK3CD-AS1Q5SR53 167 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 DEF8Q6ZN54 512 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 RD3Q7Z3Z2 195 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 SZRD1Q7Z422 152 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 GALNT5Q7Z7M9 940 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 SERPINA11Q86U17 422 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 PRIMA1Q86XR5 153 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 CCDC105Q8IYK2 499 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 KIAA2013Q8IYS2 634 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 RASSF8Q8NHQ8 419 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 ARHGEF2Q92974 986 aaKnown RBP6.26□□□□□ -1.41
VPS50-212ENST00000476413 FAM149B1Q96BN6 582 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 ERP27Q96DN0 273 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 FAM120BQ96EK7 910 aaKnown RBP6.26□□□□□ -1.41
VPS50-212ENST00000476413 NUDT16L1Q9BRJ7 211 aaKnown RBP6.26□□□□□ -1.41
VPS50-212ENST00000476413 WDR83Q9BRX9 315 aaKnown RBP6.26□□□□□ -1.41
VPS50-212ENST00000476413 H2AFJQ9BTM1 129 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 QTRT1Q9BXR0 403 aaKnown RBP6.26□□□□□ -1.41
VPS50-212ENST00000476413 SYNCQ9H7C4 482 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 THSD1Q9NS62 852 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 RNF146Q9NTX7 359 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 FLRT1Q9NZU1 646 aa6.26□□□□□ -1.41
VPS50-212ENST00000476413 ZNF70Q9UC06 446 aaPredicted RBP6.26□□□□□ -1.41
VPS50-212ENST00000476413 WDR33Q9C0J8 1336 aaKnown RBP6.25□□□□□ -1.41
VPS50-212ENST00000476413 PTGES3LE9PB15 166 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 VILLO15195 856 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 TLX3O43711 291 aaPredicted RBP6.25□□□□□ -1.41
VPS50-212ENST00000476413 CNOT3O75175 753 aaKnown RBP6.25□□□□□ -1.41
VPS50-212ENST00000476413 OR2C1O95371 312 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 NUDT3O95989 172 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 SRD5A1P18405 259 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 BMP5P22003 454 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 HOXD9P28356 352 aaPredicted RBP6.25□□□□□ -1.41
VPS50-212ENST00000476413 TNFSF8P32971 234 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 ACTN2P35609 894 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 UBA7P41226 1012 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 PIP4K2AP48426 406 aaPredicted RBP6.25□□□□□ -1.41
VPS50-212ENST00000476413 MC1RQ01726 317 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 GHRHRQ02643 423 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 GRIK3Q13003 919 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 FGFBP1Q14512 234 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 SMTNL2Q2TAL5 461 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 KIAA1614Q5VZ46 1190 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 ENOSF1Q7L5Y1 443 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 TBC1D26Q86UD7 250 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 ADGRG3Q86Y34 549 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 GPSM1Q86YR5 675 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 RPAP2Q8IXW5 612 aaPredicted RBP6.25□□□□□ -1.41
VPS50-212ENST00000476413 ZDHHC23Q8IYP9 409 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 PDILTQ8N807 584 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 LRRC57Q8N9N7 239 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 NEK9Q8TD19 979 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 SCFD2Q8WU76 684 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 NUF2Q9BZD4 464 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 FBRSL1Q9HCM7 1045 aaKnown RBP6.25□□□□□ -1.41
VPS50-212ENST00000476413 PLSCR4Q9NRQ2 329 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 ANKEF1Q9NU02 776 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 TMEM184CQ9NVA4 438 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 EHD2Q9NZN4 543 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 SEL1LQ9UBV2 794 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 POLG2Q9UHN1 485 aa6.25□□□□□ -1.41
VPS50-212ENST00000476413 TTBK1Q5TCY1 1321 aaPredicted RBP6.25□□□□□ -1.41
VPS50-212ENST00000476413 hCG_1807616A0A1W2PRN6 198 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 FRMD3A2A2Y4 597 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 C17orf102A2RUQ5 167 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms