RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 RPF2Q9H7B2 306 aaKnown RBP8.49□□□□□ -1.05
VAPB-205ENST00000476395 ATAD3AQ9NVI7 634 aa8.49□□□□□ -1.05
VAPB-205ENST00000476395 COPG2Q9UBF2 871 aa8.49□□□□□ -1.05
VAPB-205ENST00000476395 ITGA11Q9UKX5 1188 aa8.49□□□□□ -1.05
VAPB-205ENST00000476395 ARHGAP26Q9UNA1 814 aa8.49□□□□□ -1.05
VAPB-205ENST00000476395 SLC27A5Q9Y2P5 690 aa8.49□□□□□ -1.05
VAPB-205ENST00000476395 ZCWPW2A0A1B0GU75 182 aa8.49□□□□□ -1.05
VAPB-205ENST00000476395 INHBBP09529 407 aa8.49□□□□□ -1.05
VAPB-205ENST00000476395 MCF2P10911 925 aa8.49□□□□□ -1.05
VAPB-205ENST00000476395 TKTP29401 623 aaKnown RBP8.49□□□□□ -1.05
VAPB-205ENST00000476395 HOXA11P31270 313 aaPredicted RBP8.49□□□□□ -1.05
VAPB-205ENST00000476395 PTPN9P43378 593 aa8.49□□□□□ -1.05
VAPB-205ENST00000476395 EPGNQ6UW88 154 aa8.49□□□□□ -1.05
VAPB-205ENST00000476395 ZNF781Q8N8C0 355 aa8.49□□□□□ -1.05
VAPB-205ENST00000476395 SUN5Q8TC36 379 aa8.49□□□□□ -1.05
VAPB-205ENST00000476395 RCN3Q96D15 328 aa8.49□□□□□ -1.05
VAPB-205ENST00000476395 C1QTNF1Q9BXJ1 281 aa8.49□□□□□ -1.05
VAPB-205ENST00000476395 C2orf40Q9H1Z8 148 aa8.49□□□□□ -1.05
VAPB-205ENST00000476395 FAM49BQ9NUQ9 324 aa8.49□□□□□ -1.05
VAPB-205ENST00000476395 IGSF9Q9P2J2 1179 aa8.49□□□□□ -1.05
VAPB-205ENST00000476395 GIPC1O14908 333 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 AQP9O43315 295 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 GAS2O43903 313 aaKnown RBP8.48□□□□□ -1.05
VAPB-205ENST00000476395 KDM1AO60341 852 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 LTFP02788 710 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 LMO2P25791 158 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 MGAT1P26572 445 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 EPHX2P34913 555 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 CREB5Q02930 508 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 KLF10Q13118 480 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 DLG2Q15700 870 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 ADRM1Q16186 407 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 KRT80Q6KB66 452 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 ALKAL1Q6UXT8 129 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 CYP2R1Q6VVX0 501 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 DSG4Q86SJ6 1040 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 ZBTB8OSQ8IWT0 167 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 DSELQ8IZU8 1212 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 CADM3Q8N126 398 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 ZNF786Q8N393 782 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 NT5C3BQ969T7 300 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 TAMM41Q96BW9 452 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 TBCBQ99426 244 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 AGAP2Q99490 1192 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 IER2Q9BTL4 223 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 NGRNQ9NPE2 291 aaKnown RBP8.48□□□□□ -1.05
VAPB-205ENST00000476395 C1orf232A0A0U1RR37 186 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 FAM72CH0Y354 149 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 VTNP04004 478 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 ERVK-10P10266 1014 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 PRDX6P30041 224 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 ABCG1P45844 678 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 ARHGAP1Q07960 439 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 FAM72AQ5TYM5 149 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 KCTD11Q693B1 232 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 FAM72DQ6L9T8 149 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 SCYL2Q6P3W7 929 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 GPR141Q7Z602 305 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 FAM72BQ86X60 149 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 NT5DC4Q86YG4 428 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 REM2Q8IYK8 340 aaPredicted RBP8.48□□□□□ -1.05
VAPB-205ENST00000476395 AFG1LQ8WV93 481 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 TMA16Q96EY4 203 aaKnown RBP8.48□□□□□ -1.05
VAPB-205ENST00000476395 RMND5BQ96G75 393 aaPredicted RBP8.48□□□□□ -1.05
VAPB-205ENST00000476395 ATXN7L3BQ96GX2 97 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 NUF2Q9BZD4 464 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 CEP44Q9C0F1 390 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 CDH19Q9H159 772 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 ASB7Q9H672 318 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 POLE4Q9NR33 117 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 DPP3Q9NY33 737 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 MORF4L1Q9UBU8 362 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 FZD10Q9ULW2 581 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 PCDHGA3Q9Y5H0 932 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 BEST1O76090 585 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 FYNP06241 537 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 TNK2Q07912 1038 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 TRAF2Q12933 501 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 RALGDSQ12967 914 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 DNASE1L3Q13609 305 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 GALNT18Q6P9A2 607 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 CARM1Q86X55 608 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 MFSD6LQ8IWD5 586 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 OFCC1Q8IZS5 231 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 SCAIQ8N9R8 606 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 HMGCLL1Q8TB92 370 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 C18orf25Q96B23 403 aaPredicted RBP8.48□□□□□ -1.05
VAPB-205ENST00000476395 FAM167AQ96KS9 214 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 EHD1Q9H4M9 534 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 COG4Q9H9E3 785 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 DCAF16Q9NXF7 216 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 RBPJLQ9UBG7 517 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 STK39Q9UEW8 545 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 SORCS3Q9UPU3 1222 aa8.48□□□□□ -1.05
VAPB-205ENST00000476395 A0A0A0MRY4 1105 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 PRSS51A0A1B0GVH4 220 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 TARM1B6A8C7 271 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 B4GAT1O43505 415 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 SULT1C4O75897 302 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 ATP5BP06576 529 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms