RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 HEPHQ9BQS7 1158 aa16.46■□□□□ 0.23
COL1A1-205ENST00000476387 TM6SF2Q9BZW4 377 aa16.46■□□□□ 0.23
COL1A1-205ENST00000476387 IP6K2Q9UHH9 426 aa16.46■□□□□ 0.23
COL1A1-205ENST00000476387 ACTL7AQ9Y615 435 aa16.46■□□□□ 0.23
COL1A1-205ENST00000476387 ANKRD36A6QL64 1941 aa16.46■□□□□ 0.23
COL1A1-205ENST00000476387 ARID1BQ8NFD5 2236 aaPredicted RBP16.46■□□□□ 0.23
COL1A1-205ENST00000476387 CACNA1GO43497 2377 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 TRPM6Q9BX84 2022 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 A0A1W2PQU0 124 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 RASA4BC9J798 803 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 RASA4O43374 803 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 MFAP3LO75121 409 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 ZNF821O75541 412 aaPredicted RBP16.45■□□□□ 0.22
COL1A1-205ENST00000476387 LEFTY1O75610 366 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 CYP1A2P05177 515 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 SNRPD1P62314 119 aaKnown RBP16.45■□□□□ 0.22
COL1A1-205ENST00000476387 SLC18A3Q16572 532 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 ZNF284Q2VY69 593 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 ARSIQ5FYB1 569 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 LEKR1Q6ZMV7 388 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 RFX8Q6ZV50 586 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 KANSL1Q7Z3B3 1105 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 TMPRSS12Q86WS5 348 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 PLPP6Q8IY26 295 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 UMODL1-AS1Q8N2C9 162 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 CASKIN2Q8WXE0 1202 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 CTNNBL1Q8WYA6 563 aaPredicted RBP16.45■□□□□ 0.22
COL1A1-205ENST00000476387 HMCESQ96FZ2 354 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 KLHDC7BQ96G42 594 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 NOL6Q9H6R4 1146 aaKnown RBP16.45■□□□□ 0.22
COL1A1-205ENST00000476387 ZDHHC6Q9H6R6 413 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 ZWILCHQ9H900 591 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 ABHD10Q9NUJ1 306 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 WASF2Q9Y6W5 498 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 SHROOM3Q8TF72 1996 aa16.45■□□□□ 0.22
COL1A1-205ENST00000476387 SSU72P8A0A1W2PR75 194 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 MYO1FO00160 1098 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 AKR1B10O60218 316 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 RFPL3O75679 317 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 CD160O95971 181 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 GSRP00390 522 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 ITGB7P26010 798 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 AKT2P31751 481 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 ARL4AP40617 200 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 BNIP3Q12983 259 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 SERINC3Q13530 473 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 CAMK2BQ13554 666 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 SMTNL2Q2TAL5 461 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 DHRS13Q6UX07 377 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 CYP4V2Q6ZWL3 525 aaPredicted RBP16.44■□□□□ 0.22
COL1A1-205ENST00000476387 CNGA4Q8IV77 575 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 EID2Q8N6I1 236 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 NIPA2Q8N8Q9 360 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 OR2AP1Q8NGE2 309 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 FAM174AQ8TBP5 190 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 ZNF564Q8TBZ8 553 aaPredicted RBP16.44■□□□□ 0.22
COL1A1-205ENST00000476387 TSC1Q92574 1164 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 ARHGEF26Q96DR7 871 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 TRIM5Q9C035 493 aa16.44■□□□□ 0.22
COL1A1-205ENST00000476387 HECAQ9UBI9 543 aaPredicted RBP16.44■□□□□ 0.22
COL1A1-205ENST00000476387 ARHGAP42A6NI28 874 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 H3BRJ5 948 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 SLC31A1O15431 190 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 TMCC1O94876 653 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 IGSF6O95976 241 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 HNRNPA2B1P22626 353 aaKnown RBP16.43■□□□□ 0.22
COL1A1-205ENST00000476387 SSR1P43307 286 aaKnown RBP16.43■□□□□ 0.22
COL1A1-205ENST00000476387 ACADVLP49748 655 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 NEK3P51956 506 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 NDST2P52849 883 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 MAPK8IP2Q13387 824 aaPredicted RBP16.43■□□□□ 0.22
COL1A1-205ENST00000476387 TMEM259Q4ZIN3 620 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 BOLA3Q53S33 107 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 CCDC157Q569K6 752 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 SARM1Q6SZW1 724 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 ZSCAN30Q86W11 494 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 PDCD7Q8N8D1 485 aaKnown RBP16.43■□□□□ 0.22
COL1A1-205ENST00000476387 OR6K2Q8NGY2 324 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 HSPH1Q92598 858 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 CELF6Q96J87 481 aaKnown RBP16.43■□□□□ 0.22
COL1A1-205ENST00000476387 BTBD6Q96KE9 485 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 GDAP1L1Q96MZ0 367 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.43■□□□□ 0.22
COL1A1-205ENST00000476387 CTTNBP2NLQ9P2B4 639 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 NENFQ9UMX5 172 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 ITPR1Q14643 2758 aa16.43■□□□□ 0.22
COL1A1-205ENST00000476387 TRABD2BA6NFA1 517 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 RNF103O00237 685 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 KRIT1O00522 736 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 AP1G1O43747 822 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 PCDH8O95206 1070 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 H2AFZP0C0S5 128 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 THEGLP0DJG4 465 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 ADRB3P13945 408 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 PRLRP16471 622 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 ERCC2P18074 760 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 HNF1BP35680 557 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 ADKP55263 362 aaKnown RBP16.42■□□□□ 0.22
COL1A1-205ENST00000476387 RHOAP61586 193 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 RAD51Q06609 339 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms