RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	OR52N4	Q8NGI2	321 aa		5.21	□□□□□ -1.58
PRKD3-208	ENST00000475912	ZKSCAN4	Q969J2	545 aa	Predicted RBP	5.21	□□□□□ -1.58
PRKD3-208	ENST00000475912	PRPF18	Q99633	342 aa	Known RBP	5.21	□□□□□ -1.58
PRKD3-208	ENST00000475912	TMEM39B	Q9GZU3	492 aa		5.21	□□□□□ -1.58
PRKD3-208	ENST00000475912	TTYH1	Q9H313	450 aa	Predicted RBP	5.21	□□□□□ -1.58
PRKD3-208	ENST00000475912	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
PRKD3-208	ENST00000475912	TSPYL4	Q9UJ04	414 aa		5.21	□□□□□ -1.58
PRKD3-208	ENST00000475912	CDC23	Q9UJX2	597 aa		5.21	□□□□□ -1.58
PRKD3-208	ENST00000475912	ANAPC4	Q9UJX5	808 aa		5.21	□□□□□ -1.58
PRKD3-208	ENST00000475912	COMMD10	Q9Y6G5	202 aa		5.21	□□□□□ -1.58
PRKD3-208	ENST00000475912	IGKV2D-30	A0A075B6S6	120 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	RHOD	O00212	210 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	PDHX	O00330	501 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	WDHD1	O75717	1129 aa	Predicted RBP	5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	CHRNB1	P11230	501 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	FOSL2	P15408	326 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	HOXB6	P17509	224 aa	Known RBP	5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	TGM2	P21980	687 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	THBS3	P49746	956 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	NANOS2	P60321	138 aa	Known RBP	5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	GAD2	Q05329	585 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	KIAA1755	Q5JYT7	1200 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	DGKK	Q5KSL6	1271 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	PIK3CD-AS1	Q5SR53	167 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	C6orf10	Q5SRN2	563 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	ISM2	Q6H9L7	571 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	ERO1B	Q86YB8	467 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	SYTL1	Q8IYJ3	562 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	WDR60	Q8WVS4	1066 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	ASB5	Q8WWX0	329 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	ELAC2	Q9BQ52	826 aa	Known RBP	5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	C11orf49	Q9H6J7	331 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	MLXIP	Q9HAP2	919 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	RAB21	Q9UL25	225 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	LAMP3	Q9UQV4	416 aa		5.2	□□□□□ -1.58
PRKD3-208	ENST00000475912	ECM29	Q5VYK3	1845 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	AQP12B	A6NM10	295 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	KIF28P	B7ZC32	967 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	SNAP23	O00161	211 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	DNPH1	O43598	174 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	ASNA1	O43681	348 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	LDHA	P00338	332 aa	Known RBP	5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	ALDOA	P04075	364 aa	Known RBP	5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	ALDOC	P09972	364 aa	Known RBP	5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	CCKAR	P32238	428 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	GRK5	P34947	590 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	FAM3B	P58499	235 aa	Predicted RBP	5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	RPL15	P61313	204 aa	Known RBP	5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	TLE3	Q04726	772 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	PPIL2	Q13356	520 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	PTGR1	Q14914	329 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	RUSC1-AS1	Q66K80	236 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	ANKRD23	Q86SG2	305 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	FAM186B	Q8IYM0	893 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	ADPRHL1	Q8NDY3	354 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	MORC4	Q8TE76	937 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	REXO5	Q96IC2	774 aa	Known RBP	5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	MARK4	Q96L34	752 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	PLEKHF1	Q96S99	279 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	WDR83	Q9BRX9	315 aa	Known RBP	5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	KRTAP1-5	Q9BYS1	174 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	OSBPL5	Q9H0X9	879 aa	Predicted RBP	5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	CCDC134	Q9H6E4	229 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	TDRD3	Q9H7E2	651 aa	Known RBP	5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	SFXN1	Q9H9B4	322 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	CD209	Q9NNX6	404 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	ZNF580	Q9UK33	172 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	SLC12A4	Q9UP95	1085 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	NUDC	Q9Y266	331 aa		5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	DDX60L	Q5H9U9	1706 aa	Known RBP	5.19	□□□□□ -1.58
PRKD3-208	ENST00000475912	TCP10L2	B9ZVM9	353 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	NFATC1	O95644	943 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	PCCA	P05165	728 aa	Predicted RBP	5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	CAPN2	P17655	700 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	IGFBP2	P18065	325 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	SERPINB3	P29508	390 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	HTR3A	P46098	478 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	RBM5	P52756	815 aa	Known RBP eCLIP	5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	FOXL2	P58012	376 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	TNFAIP1	Q13829	316 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	STARD3	Q14849	445 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	LRRC26	Q2I0M4	334 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	ASPHD1	Q5U4P2	390 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	XRRA1	Q6P2D8	792 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	LVRN	Q6Q4G3	990 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	TRAPPC11	Q7Z392	1133 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	EXOC8	Q8IYI6	725 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	NRSN1	Q8IZ57	195 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	SPICE1	Q8N0Z3	855 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	PAQR4	Q8N4S7	273 aa	Predicted RBP	5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	EXD3	Q8N9H8	876 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	KAT2A	Q92830	837 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	CFAP53	Q96M91	514 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	MECR	Q9BV79	373 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	TAGLN3	Q9UI15	199 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	DLG5	Q8TDM6	1919 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	REV3L	O60673	3130 aa		5.18	□□□□□ -1.58
PRKD3-208	ENST00000475912	ARAP2	Q8WZ64	1704 aa		5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms