RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 SPATA31A6Q5VVP1 1343 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 SPATA31A7Q8IWB4 1347 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 ERVV-1B6SEH8 477 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 POLRMTO00411 1230 aaKnown RBP11.63□□□□□ -0.55
U2AF1-209ENST00000475639 CD3EAPO15446 510 aaKnown RBP11.63□□□□□ -0.55
U2AF1-209ENST00000475639 GUCY1B2O75343 617 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 ENO2P09104 434 aaPredicted RBP11.63□□□□□ -0.55
U2AF1-209ENST00000475639 CYP2C9P11712 490 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 CNTFP26441 200 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 RPL19P84098 196 aaKnown RBP11.63□□□□□ -0.55
U2AF1-209ENST00000475639 MAD2L1Q13257 205 aaPredicted RBP11.63□□□□□ -0.55
U2AF1-209ENST00000475639 SNRNP35Q16560 246 aaKnown RBP11.63□□□□□ -0.55
U2AF1-209ENST00000475639 CCDC157Q569K6 752 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 OLFML2AQ68BL7 652 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 TIGD7Q6NT04 549 aaPredicted RBP11.63□□□□□ -0.55
U2AF1-209ENST00000475639 ZDHHC13Q8IUH4 622 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 LRRC17Q8N6Y2 441 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 MMP19Q99542 508 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 SLC2A11Q9BYW1 496 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 NIF3L1Q9GZT8 377 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 CYP4F12Q9HCS2 524 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 PSMD13Q9UNM6 376 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 TIMM22Q9Y584 194 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 SLIT2O94813 1529 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.62□□□□□ -0.55
U2AF1-209ENST00000475639 IL18RAPO95256 599 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 S100A1P23297 94 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 RAB2AP61019 212 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 CTBSQ01459 385 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 FGD3Q5JSP0 725 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.62□□□□□ -0.55
U2AF1-209ENST00000475639 ERO1BQ86YB8 467 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 ZFPM1Q8IX07 1006 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 MYLPFQ96A32 169 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 CHID1Q9BWS9 393 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 FRMD8P1Q9BZ68 369 aaPredicted RBP11.62□□□□□ -0.55
U2AF1-209ENST00000475639 ACSS3Q9H6R3 686 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 TDRD3Q9H7E2 651 aaKnown RBP11.62□□□□□ -0.55
U2AF1-209ENST00000475639 FKBP14Q9NWM8 211 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 ADPRHL2Q9NX46 363 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 IRAK3Q9Y616 596 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 FBXO21O94952 628 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 ZBTB11O95625 1053 aaPredicted RBP11.62□□□□□ -0.55
U2AF1-209ENST00000475639 NUDT14O95848 222 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 UMPSP11172 480 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 KCNC4Q03721 635 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 CYP24A1Q07973 514 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 MSS51Q4VC12 460 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 RNASEH2BQ5TBB1 312 aaKnown RBP11.62□□□□□ -0.55
U2AF1-209ENST00000475639 GPAT2Q6NUI2 795 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 FAM126BQ8IXS8 530 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 KCTD14Q9BQ13 255 aaPredicted RBP11.62□□□□□ -0.55
U2AF1-209ENST00000475639 DNPEPQ9ULA0 475 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 ING4Q9UNL4 249 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 FOSL2P15408 326 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 LBPP18428 481 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 PLCL1Q15111 1095 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 TAF13Q15543 124 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 BORCS5Q969J3 196 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 ADGRE3Q9BY15 652 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 XPNPEP1Q9NQW7 623 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 CRNNQ9UBG3 495 aaPredicted RBP11.62□□□□□ -0.55
U2AF1-209ENST00000475639 RBMX2Q9Y388 322 aaKnown RBP11.62□□□□□ -0.55
U2AF1-209ENST00000475639 RAD51BO15315 384 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 PLA2G6O60733 806 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 HLA-DRAP01903 254 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 PRDX6P30041 224 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 CACNB3P54284 484 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 NME5P56597 212 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 PEX6Q13608 980 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 ZNF829Q3KNS6 432 aaPredicted RBP11.62□□□□□ -0.55
U2AF1-209ENST00000475639 ZFP1Q6P2D0 407 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 CHPFQ8IZ52 775 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 DEFB107AQ8IZN7 70 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 FAM129BQ96TA1 746 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 C9orf16Q9BUW7 83 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 C1orf50Q9BV19 199 aa11.62□□□□□ -0.55
U2AF1-209ENST00000475639 STX16-NPEPL1H3BU86 382 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 IFRD1O00458 451 aaPredicted RBP11.61□□□□□ -0.55
U2AF1-209ENST00000475639 STX16O14662 325 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 NDST2P52849 883 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 DLG4P78352 724 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 SLC18A2Q05940 514 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 TEX44Q53QW1 395 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 NIPAL1Q6NVV3 410 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 GATAD2AQ86YP4 633 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 SLC22A9Q8IVM8 553 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 CAPSLQ8WWF8 208 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 HGH1Q9BTY7 390 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 KATNAL1Q9BW62 490 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 PRMT7Q9NVM4 692 aaPredicted RBP11.61□□□□□ -0.55
U2AF1-209ENST00000475639 EHD3Q9NZN3 535 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 LIMD1Q9UGP4 676 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 CHP2O43745 196 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 KLHL41O60662 606 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 RPN2P04844 631 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 IRF1P10914 325 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 GLRBP48167 497 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 ALDH9A1P49189 494 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 FCHO2Q0JRZ9 810 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms