RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 PGK2P07205 417 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 SMIM18P0DKX4 95 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 ALOX12P18054 663 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 ARF4P18085 180 aaPredicted RBP6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 ITGB6P18564 788 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 PTPN4P29074 926 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 MMP13P45452 471 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 POU3F4P49335 361 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 PPM1FP49593 454 aaPredicted RBP6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 AIF1P55008 147 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 HAND2P61296 217 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 TSPAN5P62079 268 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 PSMC5P62195 406 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 UBE2IP63279 158 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 ZNF844Q08AG5 666 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 BAMBIQ13145 260 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 CDK5R2Q13319 367 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 NAB1Q13506 487 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 GALNT3Q14435 633 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 MAPKAPK3Q16644 382 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 NADK2Q4G0N4 442 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 AARDQ4LEZ3 155 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 ANKRD20A4Q4UJ75 823 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 PXDC1Q5TGL8 231 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 PDPK2PQ6A1A2 396 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 LILRA6Q6PI73 481 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 IGF2-ASQ6U949 168 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 TTC7BQ86TV6 843 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 COMTD1Q86VU5 262 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 KSR1Q8IVT5 923 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 ADGRF2Q8IZF7 708 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 CCDC33Q8N5R6 958 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 TBC1D19Q8N5T2 526 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 TOP6BLQ8N6T0 577 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 PSD4Q8NDX1 1056 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 SLC17A8Q8NDX2 589 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 ZFP28Q8NHY6 868 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 VANGL1Q8TAA9 524 aaPredicted RBP6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 FBXO30Q8TB52 745 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 KCNG4Q8TDN1 519 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 FBLIM1Q8WUP2 373 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 NRG4Q8WWG1 115 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 MYDGFQ969H8 173 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 CHFRQ96EP1 664 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 AK8Q96MA6 479 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 TWNKQ96RR1 684 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 KRT12Q99456 494 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 SLC29A1Q99808 456 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 KATNAL1Q9BW62 490 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 SLC12A9Q9BXP2 914 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 HDAC8Q9BY41 377 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 NYXQ9GZU5 481 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 MS4A5Q9H3V2 200 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 CUEDC2Q9H467 287 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 ARMC7Q9H6L4 198 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 NMRK2Q9NPI5 230 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 VPS45Q9NRW7 570 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 CATSPERZQ9NTU4 200 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 GPATCH2Q9NW75 528 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 LUZP4Q9P127 313 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 POU2F3Q9UKI9 436 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 KCNH3Q9ULD8 1083 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 CNOT6Q9ULM6 557 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 NFU1Q9UMS0 254 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 ERVK-19Q9WJR5 959 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 DTNAQ9Y4J8 743 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 IPPQ9Y573 584 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 TCHHQ07283 1943 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 TECPR2O15040 1411 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 ADGRF5Q8IZF2 1346 aa6.07□□□□□ -1.44
ECHDC1-215ENST00000475319 ZSCAN5CA6NGD5 496 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 ARGFXA6NJG6 315 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 TARM1B6A8C7 271 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 H0YGN5 161 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 H7C1D1 291 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 PMM2O15305 246 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 ITM2AO43736 263 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 KRT86O43790 486 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 MFAP3LO75121 409 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 OR7A10O76100 309 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 MYO1DO94832 1006 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 CDK14O94921 469 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 ZWINTO95229 277 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 CBX7O95931 251 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 SLC3A2P08195 630 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 ANPEPP15144 967 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 JUNBP17275 347 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 TRHRP34981 398 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 RFC1P35251 1148 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 GRK3P35626 688 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 ARL1P40616 181 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 GPR3P46089 330 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 MTIF2P46199 727 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 OR3A3P47888 321 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 NPTX2P47972 431 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 PCP4P48539 62 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 AK2P54819 239 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 MAGOHP61326 146 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 CDK16Q00536 496 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms