RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 GBE1Q04446 702 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 NSUN2Q08J23 767 aaKnown RBP eCLIP16.44■□□□□ 0.22
SRM-204ENST00000475189 CCDC15Q0P6D6 951 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 KIF5AQ12840 1032 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 AASDHQ4L235 1098 aaPredicted RBP16.44■□□□□ 0.22
SRM-204ENST00000475189 ODF2Q5BJF6 829 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 ZNF805Q5CZA5 627 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 GDPD4Q6W3E5 623 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 SRLQ86TD4 932 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 LRRC8AQ8IWT6 810 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 TXLNBQ8N3L3 684 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 ZCCHC9Q8N567 271 aaKnown RBP16.44■□□□□ 0.22
SRM-204ENST00000475189 LRRC57Q8N9N7 239 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 CCDC112Q8NEF3 446 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 KRT35Q92764 455 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 KLHL32Q96NJ5 620 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 PSKH2Q96QS6 385 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 OSBPL1AQ9BXW6 950 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 EBF2Q9HAK2 575 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 CAPN10Q9HC96 672 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 DTLQ9NZJ0 730 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 SUSD2Q9UGT4 822 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 SEPT3Q9UH03 358 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 SLC6A14Q9UN76 642 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 ADGRG1Q9Y653 693 aa16.44■□□□□ 0.22
SRM-204ENST00000475189 TP53BP1Q12888 1972 aaPredicted RBP16.44■□□□□ 0.22
SRM-204ENST00000475189 A0A1B0GTW7 788 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 A0A1W2PPC4 97 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 LNP1A1A4G5 178 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 GRID2IPA4D2P6 1211 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 PRR5-ARHGAP8B1AHC4 643 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 CFIP05156 583 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 ADRB3P13945 408 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 GNSP15586 552 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 CD27P26842 260 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 CDKN2BP42772 138 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 RENBPP51606 427 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 ARHGAP8P85298 464 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 TAZQ16635 292 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 IFI16Q16666 785 aaKnown RBP16.43■□□□□ 0.22
SRM-204ENST00000475189 FBXL19Q6PCT2 694 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 SPOCD1Q6ZMY3 1216 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 RFX6Q8HWS3 928 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 KATNAL2Q8IYT4 538 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 KIAA1524Q8TCG1 905 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 TSGA13Q96PP4 275 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 NUSAP1Q9BXS6 441 aaKnown RBP16.43■□□□□ 0.22
SRM-204ENST00000475189 MAK16Q9BXY0 300 aaKnown RBP16.43■□□□□ 0.22
SRM-204ENST00000475189 PREBQ9HCU5 417 aa16.43■□□□□ 0.22
SRM-204ENST00000475189 MACROD2A1Z1Q3 448 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 APOL1O14791 398 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 BCAT2O15382 392 aaPredicted RBP16.42■□□□□ 0.22
SRM-204ENST00000475189 LATO43561 262 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 RNGTTO60942 597 aaKnown RBP16.42■□□□□ 0.22
SRM-204ENST00000475189 PIGNO95427 931 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 CCNCP24863 283 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 CTNNA1P35221 906 aaKnown RBP16.42■□□□□ 0.22
SRM-204ENST00000475189 ZNF235Q14590 738 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 GRM3Q14832 879 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 MARC1Q5VT66 337 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 TRIM69Q86WT6 500 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 RCOR2Q8IZ40 523 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 PGBD5Q8N414 524 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 TEX26Q8N6G2 289 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.42■□□□□ 0.22
SRM-204ENST00000475189 LRRN4Q8WUT4 740 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 NSMCE1Q8WV22 266 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 NSMCE3Q96MG7 304 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 SUV39H2Q9H5I1 410 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 TM9SF3Q9HD45 589 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 FSCN3Q9NQT6 498 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 DKK3Q9UBP4 350 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 TPX2Q9ULW0 747 aaKnown RBP16.42■□□□□ 0.22
SRM-204ENST00000475189 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.42■□□□□ 0.22
SRM-204ENST00000475189 PCDHA3Q9Y5H8 950 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 FADS3Q9Y5Q0 445 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 LAMA1P25391 3075 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 DMXL1Q9Y485 3027 aa16.42■□□□□ 0.22
SRM-204ENST00000475189 LRRK1Q38SD2 2015 aa16.41■□□□□ 0.22
SRM-204ENST00000475189 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.41■□□□□ 0.22
SRM-204ENST00000475189 TTC24A2A3L6 582 aaPredicted RBP16.41■□□□□ 0.22
SRM-204ENST00000475189 MATN3O15232 486 aa16.41■□□□□ 0.22
SRM-204ENST00000475189 AP1G1O43747 822 aa16.41■□□□□ 0.22
SRM-204ENST00000475189 GJB3O75712 270 aa16.41■□□□□ 0.22
SRM-204ENST00000475189 ZRANB2O95218 330 aaKnown RBP eCLIP16.41■□□□□ 0.22
SRM-204ENST00000475189 KRT10P13645 584 aa16.41■□□□□ 0.22
SRM-204ENST00000475189 ZFXP17010 805 aaPredicted RBP16.41■□□□□ 0.22
SRM-204ENST00000475189 MX2P20592 715 aa16.41■□□□□ 0.22
SRM-204ENST00000475189 HSPA9P38646 679 aaKnown RBP16.41■□□□□ 0.22
SRM-204ENST00000475189 ABL2P42684 1182 aa16.41■□□□□ 0.22
SRM-204ENST00000475189 MMP13P45452 471 aa16.41■□□□□ 0.22
SRM-204ENST00000475189 SCNN1BP51168 640 aa16.41■□□□□ 0.22
SRM-204ENST00000475189 CCZ1BP86790 482 aa16.41■□□□□ 0.22
SRM-204ENST00000475189 CCZ1P86791 482 aaPredicted RBP16.41■□□□□ 0.22
SRM-204ENST00000475189 HNRNPDQ14103 355 aaKnown RBP16.41■□□□□ 0.22
SRM-204ENST00000475189 TIGD7Q6NT04 549 aaPredicted RBP16.41■□□□□ 0.22
SRM-204ENST00000475189 NEK5Q6P3R8 708 aa16.41■□□□□ 0.22
SRM-204ENST00000475189 NPNTQ6UXI9 565 aa16.41■□□□□ 0.22
SRM-204ENST00000475189 NT5DC3Q86UY8 548 aa16.41■□□□□ 0.22
SRM-204ENST00000475189 CAMK1DQ8IU85 385 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms