RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 TMC6Q7Z403 805 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 SLC22A18ASQ8N1D0 253 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 UMODL1-AS1Q8N2C9 162 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 DENND6BQ8NEG7 585 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 NXPE2Q96DL1 559 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 BMFQ96LC9 184 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 EIF3CQ99613 913 aaKnown RBP20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 C1QTNF2Q9BXJ5 285 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 TTYH3Q9C0H2 523 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 NOL6Q9H6R4 1146 aaKnown RBP20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 GPR27Q9NS67 375 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 GPSM3Q9Y4H4 160 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 ZFYVE26Q68DK2 2539 aa20.66■□□□□ 0.9
PDLIM4-206ENST00000474421 IGLON5A6NGN9 336 aa20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 RASA4BC9J798 803 aa20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 TRIM38O00635 465 aa20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 TEX33O43247 280 aa20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 RASA4O43374 803 aa20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 GKP32189 559 aa20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 RHOAP61586 193 aa20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 DAB2P98082 770 aa20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 SERINC3Q13530 473 aa20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 ATXN7L2Q5T6C5 722 aaPredicted RBP20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 HES3Q5TGS1 186 aa20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 CACTIN-AS1Q8N1I8 211 aa20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 BAP1Q92560 729 aa20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 KLHL32Q96NJ5 620 aa20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 SYT11Q9BT88 431 aa20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 EVA1BQ9NVM1 165 aa20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 DNAJC28Q9NX36 388 aa20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 TMEM63CQ9P1W3 806 aa20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 RALYQ9UKM9 306 aaKnown RBP20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 MFHAS1Q9Y4C4 1052 aa20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 ADAMTS20P59510 1910 aa20.65■□□□□ 0.9
PDLIM4-206ENST00000474421 POM121BA6NF01 834 aa20.64■□□□□ 0.89
PDLIM4-206ENST00000474421 H3BM21 787 aa20.64■□□□□ 0.89
PDLIM4-206ENST00000474421 ABL2P42684 1182 aa20.64■□□□□ 0.89
PDLIM4-206ENST00000474421 TPI1P60174 286 aa20.64■□□□□ 0.89
PDLIM4-206ENST00000474421 MAMLD1Q13495 774 aa20.64■□□□□ 0.89
PDLIM4-206ENST00000474421 ASIC2Q16515 512 aa20.64■□□□□ 0.89
PDLIM4-206ENST00000474421 TTC7BQ86TV6 843 aa20.64■□□□□ 0.89
PDLIM4-206ENST00000474421 PARGQ86W56 976 aa20.64■□□□□ 0.89
PDLIM4-206ENST00000474421 RFFLQ8WZ73 363 aa20.64■□□□□ 0.89
PDLIM4-206ENST00000474421 HMCESQ96FZ2 354 aa20.64■□□□□ 0.89
PDLIM4-206ENST00000474421 DUSP23Q9BVJ7 150 aa20.64■□□□□ 0.89
PDLIM4-206ENST00000474421 C1QTNF7Q9BXJ2 289 aa20.64■□□□□ 0.89
PDLIM4-206ENST00000474421 NLGN3Q9NZ94 848 aa20.64■□□□□ 0.89
PDLIM4-206ENST00000474421 DKK3Q9UBP4 350 aa20.64■□□□□ 0.89
PDLIM4-206ENST00000474421 IPO11Q9UI26 975 aaKnown RBP20.64■□□□□ 0.89
PDLIM4-206ENST00000474421 RAXQ9Y2V3 346 aa20.64■□□□□ 0.89
PDLIM4-206ENST00000474421 MYLKQ15746 1914 aa20.64■□□□□ 0.89
PDLIM4-206ENST00000474421 SPTY2D1-AS1A0A0U1RR47 76 aa20.63■□□□□ 0.89
PDLIM4-206ENST00000474421 A0A1W2PQC6 194 aa20.63■□□□□ 0.89
PDLIM4-206ENST00000474421 AREL1O15033 823 aa20.63■□□□□ 0.89
PDLIM4-206ENST00000474421 RAD51BO15315 384 aa20.63■□□□□ 0.89
PDLIM4-206ENST00000474421 FFAR2O15552 330 aa20.63■□□□□ 0.89
PDLIM4-206ENST00000474421 PSMA2P25787 234 aa20.63■□□□□ 0.89
PDLIM4-206ENST00000474421 SUOXP51687 545 aa20.63■□□□□ 0.89
PDLIM4-206ENST00000474421 NDST2P52849 883 aa20.63■□□□□ 0.89
PDLIM4-206ENST00000474421 GRM3Q14832 879 aa20.63■□□□□ 0.89
PDLIM4-206ENST00000474421 PLEKHA7Q6IQ23 1121 aa20.63■□□□□ 0.89
PDLIM4-206ENST00000474421 KLF6Q99612 283 aaPredicted RBP20.63■□□□□ 0.89
PDLIM4-206ENST00000474421 CPEB1Q9BZB8 566 aaKnown RBP20.63■□□□□ 0.89
PDLIM4-206ENST00000474421 USP29Q9HBJ7 922 aa20.63■□□□□ 0.89
PDLIM4-206ENST00000474421 SCUBE2Q9NQ36 999 aa20.63■□□□□ 0.89
PDLIM4-206ENST00000474421 UCKL1Q9NWZ5 548 aa20.63■□□□□ 0.89
PDLIM4-206ENST00000474421 TAS2R14Q9NYV8 317 aa20.63■□□□□ 0.89
PDLIM4-206ENST00000474421 CACNA1GO43497 2377 aa20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 LRRC53A6NM62 1247 aa20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 TMCO5BA8MYB1 307 aa20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 RIOK3O14730 519 aaKnown RBP20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 SCAMP1O15126 338 aa20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 CSF2P04141 144 aa20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 GZMAP12544 262 aa20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 NME1P15531 152 aaKnown RBP20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 OGDHQ02218 1023 aa20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 TARDBPQ13148 414 aaKnown RBP eCLIP20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 FZD2Q14332 565 aa20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 HCAR2Q8TDS4 363 aa20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 CXorf40AQ8TE69 158 aa20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 NCAPGQ9BPX3 1015 aa20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 EDEM3Q9BZQ6 932 aa20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 NRSN2Q9GZP1 204 aa20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 KLC2Q9H0B6 622 aa20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 AIPL1Q9NZN9 384 aa20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 UBA2Q9UBT2 640 aaPredicted RBP20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 AP4E1Q9UPM8 1137 aa20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 CLCA2Q9UQC9 943 aa20.62■□□□□ 0.89
PDLIM4-206ENST00000474421 CELSR3Q9NYQ7 3312 aa20.61■□□□□ 0.89
PDLIM4-206ENST00000474421 TOR1BO14657 336 aa20.61■□□□□ 0.89
PDLIM4-206ENST00000474421 RNF8O76064 485 aa20.61■□□□□ 0.89
PDLIM4-206ENST00000474421 CKMT1AP12532 417 aa20.61■□□□□ 0.89
PDLIM4-206ENST00000474421 XPAP23025 273 aaPredicted RBP20.61■□□□□ 0.89
PDLIM4-206ENST00000474421 ZNF165P49910 485 aa20.61■□□□□ 0.89
PDLIM4-206ENST00000474421 DUSP3P51452 185 aaPredicted RBP20.61■□□□□ 0.89
PDLIM4-206ENST00000474421 PDE1CQ14123 709 aaPredicted RBP20.61■□□□□ 0.89
PDLIM4-206ENST00000474421 PTK2BQ14289 1009 aa20.61■□□□□ 0.89
PDLIM4-206ENST00000474421 ERMARDQ5T6L9 678 aa20.61■□□□□ 0.89
PDLIM4-206ENST00000474421 DNAAF5Q86Y56 855 aa20.61■□□□□ 0.89
PDLIM4-206ENST00000474421 FAM181AQ8N9Y4 354 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms