RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 MPP3Q13368 585 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 CUL1Q13616 776 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 KCNJ11Q14654 390 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 STARD3Q14849 445 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 TPSAB1Q15661 275 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 ELF2Q15723 593 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 ERCC6LQ2NKX8 1250 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 CARD16Q5EG05 197 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 DGKKQ5KSL6 1271 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 RNASEH2BQ5TBB1 312 aaKnown RBP8.44□□□□□ -1.06
CNN3-205ENST00000474409 DUPD1Q68J44 220 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 NAPEPLDQ6IQ20 393 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 PPP1R21Q6ZMI0 780 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 SRLQ86TD4 932 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 IFT20Q8IY31 132 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 PDCD7Q8N8D1 485 aaKnown RBP8.44□□□□□ -1.06
CNN3-205ENST00000474409 MYRIPQ8NFW9 859 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 SPATA22Q8NHS9 363 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 RPLP0P6Q8NHW5 317 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 PDCD6IPQ8WUM4 868 aaKnown RBP8.44□□□□□ -1.06
CNN3-205ENST00000474409 IFT81Q8WYA0 676 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 CPT1BQ92523 772 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 EZH1Q92800 747 aaPredicted RBP8.44□□□□□ -1.06
CNN3-205ENST00000474409 IFT43Q96FT9 208 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 IMP4Q96G21 291 aaKnown RBP8.44□□□□□ -1.06
CNN3-205ENST00000474409 HINFPQ9BQA5 517 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 MLPHQ9BV36 600 aaPredicted RBP8.44□□□□□ -1.06
CNN3-205ENST00000474409 FICDQ9BVA6 458 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 ATP13A3Q9H7F0 1226 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 LRRC40Q9H9A6 602 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 TBC1D17Q9HA65 648 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 LTB4R2Q9NPC1 389 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 EIF2B3Q9NR50 452 aaKnown RBP8.44□□□□□ -1.06
CNN3-205ENST00000474409 VPS45Q9NRW7 570 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 WHRNQ9P202 907 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 HECAQ9UBI9 543 aaPredicted RBP8.44□□□□□ -1.06
CNN3-205ENST00000474409 SUN2Q9UH99 717 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 FAM153AQ9UHL3 310 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 EVLQ9UI08 416 aaPredicted RBP8.44□□□□□ -1.06
CNN3-205ENST00000474409 ANAPC5Q9UJX4 755 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 TPX2Q9ULW0 747 aaKnown RBP8.44□□□□□ -1.06
CNN3-205ENST00000474409 SHOC2Q9UQ13 582 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 STON1Q9Y6Q2 735 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 CACNA1IQ9P0X4 2223 aa8.44□□□□□ -1.06
CNN3-205ENST00000474409 LRP4O75096 1905 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 TDRD6O60522 2096 aaKnown RBP8.43□□□□□ -1.06
CNN3-205ENST00000474409 ANKRD12Q6UB98 2062 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.43□□□□□ -1.06
CNN3-205ENST00000474409 KANSL1LA0AUZ9 987 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 KRBA1A5PL33 1030 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 C1QTNF3-AMACRE9PGA6 284 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 GOLGA8MH3BSY2 632 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 STK25O00506 426 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 PSMD3O43242 534 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 SYNCRIPO60506 623 aaKnown RBP8.43□□□□□ -1.06
CNN3-205ENST00000474409 SIN3BO75182 1162 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 ZNF821O75541 412 aaPredicted RBP8.43□□□□□ -1.06
CNN3-205ENST00000474409 TMEM63AO94886 807 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 AP2A1O95782 977 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 HOXB2P14652 356 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 ITIH2P19823 946 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 CR2P20023 1033 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 MCM3P25205 808 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 NTSR1P30989 418 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 CSNK1DP48730 415 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 PLTPP55058 493 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 STARD6P59095 220 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 SARNPP82979 210 aaKnown RBP8.43□□□□□ -1.06
CNN3-205ENST00000474409 SKOR1P84550 965 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 CAV1Q03135 178 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 CCINQ13939 588 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 ELAVL3Q14576 367 aaKnown RBP8.43□□□□□ -1.06
CNN3-205ENST00000474409 GRM3Q14832 879 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 MORF4L2Q15014 288 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 SLC14A2Q15849 920 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 HNRNPA1L2Q32P51 320 aaKnown RBP8.43□□□□□ -1.06
CNN3-205ENST00000474409 HSF5Q4G112 596 aaPredicted RBP8.43□□□□□ -1.06
CNN3-205ENST00000474409 EOGTQ5NDL2 527 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 EMC10Q5UCC4 262 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 ANKRD22Q5VYY1 191 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 NCEH1Q6PIU2 408 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 DPY19L3Q6ZPD9 716 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 DSG4Q86SJ6 1040 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 HOOK3Q86VS8 718 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 CACUL1Q86Y37 369 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 STK40Q8N2I9 435 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 TXNDC5Q8NBS9 432 aaKnown RBP8.43□□□□□ -1.06
CNN3-205ENST00000474409 CHST14Q8NCH0 376 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 LPCAT1Q8NF37 534 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 ARRDC2Q8TBH0 407 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 KCNV2Q8TDN2 545 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 FRS2Q8WU20 508 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 OR8D1Q8WZ84 308 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 PRCCQ92733 491 aaPredicted RBP8.43□□□□□ -1.06
CNN3-205ENST00000474409 PTPRN2Q92932 1015 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 ERLEC1Q96DZ1 483 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 OXNAD1Q96HP4 312 aaPredicted RBP8.43□□□□□ -1.06
CNN3-205ENST00000474409 TUBGCP5Q96RT8 1024 aa8.43□□□□□ -1.06
CNN3-205ENST00000474409 UHRF1Q96T88 793 aaPredicted RBP8.43□□□□□ -1.06
CNN3-205ENST00000474409 ACOX2Q99424 681 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms