RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 SLCO1B1Q9Y6L6 691 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 LRRD1A4D1F6 860 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 SOWAHDA6NJG2 315 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 SLC31A1O15431 190 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 LCA5LO95447 670 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 NAP1L1P55209 391 aaKnown RBP14.41□□□□□ -0.1
VAMP4-203ENST00000474047 TAS2R38P59533 333 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 ZNF235Q14590 738 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 LBRQ14739 615 aaKnown RBP14.41□□□□□ -0.1
VAMP4-203ENST00000474047 PPM1JQ5JR12 505 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 TMCO4Q5TGY1 634 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 NAPEPLDQ6IQ20 393 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 PARS2Q7L3T8 475 aaKnown RBP14.41□□□□□ -0.1
VAMP4-203ENST00000474047 SRLQ86TD4 932 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 HORMAD1Q86X24 394 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.41□□□□□ -0.1
VAMP4-203ENST00000474047 KLK6Q92876 244 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 RAB7BQ96AH8 199 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 ZNF599Q96NL3 588 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 ZNF670Q9BS34 389 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 SLC32A1Q9H598 525 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 IMPACTQ9P2X3 320 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 PRAMEF26H0Y7S4 382 aa14.4□□□□□ -0.1
VAMP4-203ENST00000474047 INSIG1O15503 277 aa14.4□□□□□ -0.1
VAMP4-203ENST00000474047 LATO43561 262 aa14.4□□□□□ -0.1
VAMP4-203ENST00000474047 NEBLO76041 1014 aa14.4□□□□□ -0.1
VAMP4-203ENST00000474047 NDUFA10O95299 355 aa14.4□□□□□ -0.1
VAMP4-203ENST00000474047 KDELR1P24390 212 aa14.4□□□□□ -0.1
VAMP4-203ENST00000474047 IL4RP24394 825 aa14.4□□□□□ -0.1
VAMP4-203ENST00000474047 CDC25BP30305 580 aa14.4□□□□□ -0.1
VAMP4-203ENST00000474047 RPS21P63220 83 aaKnown RBP14.4□□□□□ -0.1
VAMP4-203ENST00000474047 SGCGQ13326 291 aa14.4□□□□□ -0.1
VAMP4-203ENST00000474047 KIF19Q2TAC6 998 aa14.4□□□□□ -0.1
VAMP4-203ENST00000474047 HLA-BQ31612 363 aa14.4□□□□□ -0.1
VAMP4-203ENST00000474047 LAYNQ6UX15 382 aa14.4□□□□□ -0.1
VAMP4-203ENST00000474047 LRRC49Q8IUZ0 686 aa14.4□□□□□ -0.1
VAMP4-203ENST00000474047 TP53INP2Q8IXH6 220 aa14.4□□□□□ -0.1
VAMP4-203ENST00000474047 RHOT1Q8IXI2 618 aa14.4□□□□□ -0.1
VAMP4-203ENST00000474047 TSEN2Q8NCE0 465 aaKnown RBP14.4□□□□□ -0.1
VAMP4-203ENST00000474047 FAM71BQ8TC56 605 aa14.4□□□□□ -0.1
VAMP4-203ENST00000474047 BAG1Q99933 345 aaPredicted RBP14.4□□□□□ -0.1
VAMP4-203ENST00000474047 CPEB1Q9BZB8 566 aaKnown RBP14.4□□□□□ -0.1
VAMP4-203ENST00000474047 EBF2Q9HAK2 575 aa14.4□□□□□ -0.1
VAMP4-203ENST00000474047 SNX11Q9Y5W9 270 aa14.4□□□□□ -0.1
VAMP4-203ENST00000474047 VILLO15195 856 aa14.39□□□□□ -0.11
VAMP4-203ENST00000474047 TSPAN6O43657 245 aa14.39□□□□□ -0.11
VAMP4-203ENST00000474047 MAGEC1O60732 1142 aa14.39□□□□□ -0.11
VAMP4-203ENST00000474047 KRT1P04264 644 aa14.39□□□□□ -0.11
VAMP4-203ENST00000474047 PRLRP16471 622 aa14.39□□□□□ -0.11
VAMP4-203ENST00000474047 AKT2P31751 481 aa14.39□□□□□ -0.11
VAMP4-203ENST00000474047 SCNN1BP51168 640 aa14.39□□□□□ -0.11
VAMP4-203ENST00000474047 NOVA1P51513 510 aaKnown RBP14.39□□□□□ -0.11
VAMP4-203ENST00000474047 ARSEP51690 589 aa14.39□□□□□ -0.11
VAMP4-203ENST00000474047 TCEAL1Q15170 157 aa14.39□□□□□ -0.11
VAMP4-203ENST00000474047 KIAA1161Q6NSJ0 714 aa14.39□□□□□ -0.11
VAMP4-203ENST00000474047 PCDH19Q8TAB3 1148 aa14.39□□□□□ -0.11
VAMP4-203ENST00000474047 ZNF830Q96NB3 372 aaPredicted RBP14.39□□□□□ -0.11
VAMP4-203ENST00000474047 TUBGCP5Q96RT8 1024 aa14.39□□□□□ -0.11
VAMP4-203ENST00000474047 MYOCQ99972 504 aa14.39□□□□□ -0.11
VAMP4-203ENST00000474047 ORAI3Q9BRQ5 295 aa14.39□□□□□ -0.11
VAMP4-203ENST00000474047 SUV39H2Q9H5I1 410 aa14.39□□□□□ -0.11
VAMP4-203ENST00000474047 ATP13A3Q9H7F0 1226 aa14.39□□□□□ -0.11
VAMP4-203ENST00000474047 DNAAF2Q9NVR5 837 aaKnown RBP14.39□□□□□ -0.11
VAMP4-203ENST00000474047 DDX56Q9NY93 547 aaKnown RBP14.39□□□□□ -0.11
VAMP4-203ENST00000474047 HYOU1Q9Y4L1 999 aa14.39□□□□□ -0.11
VAMP4-203ENST00000474047 FADS3Q9Y5Q0 445 aa14.39□□□□□ -0.11
VAMP4-203ENST00000474047 TM4SF5O14894 197 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 AP1G1O43747 822 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 PIGNO95427 931 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 COMTP21964 271 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 SERPINA4P29622 427 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 CSNK1DP48730 415 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 BCL2L1Q07817 233 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 NSUN2Q08J23 767 aaKnown RBP eCLIP14.38□□□□□ -0.11
VAMP4-203ENST00000474047 SLC10A7Q0GE19 358 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 SLC14A1Q13336 389 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 MARC1Q5VT66 337 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 LRRC38Q5VT99 294 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 KIAA1328Q86T90 577 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 RAPGEF5Q92565 580 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 ZNF641Q96N77 438 aaPredicted RBP14.38□□□□□ -0.11
VAMP4-203ENST00000474047 HAUS2Q9NVX0 235 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 DKK3Q9UBP4 350 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 CACNA1EQ15878 2313 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 PLXNA2O75051 1894 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 PCDH15Q96QU1 1955 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 TLR4O00206 839 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 KCNK3O14649 394 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 MFSD11O43934 449 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 DFNA5O60443 496 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 MAFKO60675 156 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 HSPA9P38646 679 aaKnown RBP14.38□□□□□ -0.11
VAMP4-203ENST00000474047 ABL2P42684 1182 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 BNC1Q01954 994 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 ITKQ08881 620 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 SUZ12Q15022 739 aaKnown RBP14.38□□□□□ -0.11
VAMP4-203ENST00000474047 PAFAH1B3Q15102 231 aaKnown RBP14.38□□□□□ -0.11
VAMP4-203ENST00000474047 ZNF284Q2VY69 593 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 SEL1L3Q68CR1 1132 aa14.38□□□□□ -0.11
VAMP4-203ENST00000474047 NCBP2-AS2Q69YL0 99 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms